FFCP PHASE2:Hg19::chr3:101498482..101498540,+
From FANTOM5_SSTAR
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
| Short description: | p2@FAM55C |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_FAM55C_5end |
| Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
| Association with transcript: | 143bp_to_ENST00000487830_5end |
| EntrezGene: | FAM55C |
| HGNC: | 28238 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@FAM55C |
|---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 1.31e-15 | 58 |
| myoblast | 1.31e-15 | 58 |
| multi-potent skeletal muscle stem cell | 1.31e-15 | 58 |
| muscle cell | 2.07e-14 | 55 |
| fibroblast | 9.32e-13 | 76 |
| electrically responsive cell | 4.08e-12 | 61 |
| electrically active cell | 4.08e-12 | 61 |
| smooth muscle cell | 6.20e-12 | 43 |
| smooth muscle myoblast | 6.20e-12 | 43 |
| vascular associated smooth muscle cell | 1.06e-09 | 32 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.90e-23 | 56 |
| neural rod | 1.90e-23 | 56 |
| future spinal cord | 1.90e-23 | 56 |
| neural keel | 1.90e-23 | 56 |
| brain | 6.11e-23 | 68 |
| future brain | 6.11e-23 | 68 |
| structure with developmental contribution from neural crest | 3.77e-22 | 132 |
| regional part of nervous system | 4.36e-22 | 53 |
| regional part of brain | 4.36e-22 | 53 |
| neural plate | 6.55e-22 | 82 |
Showing 1 to 10 of 64 entries
