UBERON:0000072
From FANTOM5_SSTAR
Name: | segment of respiratory tract | |
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Definition: | "An organ segment that is part of a respiratory tract [Obol]." [OBOL:automatic] | |
Xrefs: |
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Synonyms: | "respiratory tract" RELATED [MA:0000434] | |
Comments: | Note that MA:0000434 has subclasses upper and lower, so it corresponds to a segment of the tract, rather than the tract as a whole |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000063(organ segment),UBERON:0004119(endoderm-derived structure) |
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part_of: | UBERON:0000065(respiratory tract) |
Children
is a: | UBERON:0001557 (upper respiratory tract),UBERON:0001558 (lower respiratory tract),UBERON:0002186 (bronchiole) |
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part of: | UBERON:0004802 (respiratory tract epithelium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10099-102C9
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
... further results Mouse (Mus musculus)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10099-102C9
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000072 (segment of respiratory tract), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data