UBERON:0000117
From FANTOM5_SSTAR
Name: | respiratory tube |
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Definition: | "A tube in the respiratory tract." [GO:0030323] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000025(tube),UBERON:0004119(endoderm-derived structure) |
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part_of: | UBERON:0000065(respiratory tract) |
Children
is a: | UBERON:0002169 (alveolar sac),UBERON:0002185 (bronchus),UBERON:0003126 (trachea) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10019-101D1 (lung, adult, pool1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
... further results Mouse (Mus musculus)
- 10019-101D1 (lung, adult, pool1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000117 (respiratory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data