UBERON:0001242
From FANTOM5_SSTAR
Name: | intestinal mucosa | |
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Definition: | "The innermost membrane of the four coats of the intestinal wall, the other three being the submucosa, muscular layers, and serosa. (Berk et al., Gastroenterology, 4th ed, v.3, p1479)" [MESH:A.03.492.411.369] | |
Xrefs: |
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Synonyms: |
"bowel mucosa" EXACT [OBOL:automatic] "bowel mucosa of organ" EXACT [OBOL:automatic] "bowel mucous membrane" EXACT [OBOL:automatic] "bowel organ mucosa" EXACT [OBOL:automatic] "intestine mucosa" EXACT [] "intestine mucosa of organ" EXACT [OBOL:automatic] "intestine mucous membrane" EXACT [OBOL:automatic] "intestine organ mucosa" EXACT [OBOL:automatic] "mucosa of bowel" EXACT [OBOL:automatic] "mucosa of intestine" EXACT [] "mucosa of organ of bowel" EXACT [OBOL:automatic] "mucosa of organ of intestine" EXACT [OBOL:automatic] "mucous membrane of bowel" EXACT [OBOL:automatic] "mucous membrane of intestine" EXACT [OBOL:automatic] "organ mucosa of bowel" EXACT [OBOL:automatic] "organ mucosa of intestine" EXACT [OBOL:automatic] | |
Alt_id: | UBERON:FMA_15695-MA_0001537 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004786(gastrointestinal system mucosa) |
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part_of: | UBERON:0000160(intestine),UBERON:0001262(wall of intestine) |
Children
is a: | UBERON:0001204 (mucosa of small intestine) |
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derives from: | FF:0011436 (mouse intestinal mucosa- adult sample) |
part of: | UBERON:0000333 (intestinal gland),UBERON:0001204 (mucosa of small intestine),UBERON:0001277 (intestinal epithelium),UBERON:0001983 (crypt of Lieberkuhn) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
... further results Mouse (Mus musculus)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001242 (intestinal mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data