Personal tools

UBERON:0001242

From FANTOM5_SSTAR

Revision as of 10:55, 24 February 2012 by Autoedit (talk | contribs) (Created page with "{{UBERON |id=UBERON:0001242 |name=intestinal mucosa |namespace= |def="The innermost membrane of the four coats of the intestinal wall, the other three being the submucosa,...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:intestinal mucosa
Definition:"The innermost membrane of the four coats of the intestinal wall, the other three being the submucosa, muscular layers, and serosa. (Berk et al., Gastroenterology, 4th ed, v.3, p1479)" [MESH:A.03.492.411.369]
Xrefs:
links:

BTO:0000642
FMA:15695
GAID:296
MA:0001537
MESH:A.03.492.411.369
ncithesaurus:Intestinal_Mucosa

SCTID:362080002
Synonyms: "bowel mucosa" EXACT [OBOL:automatic]
"bowel mucosa of organ" EXACT [OBOL:automatic]
"bowel mucous membrane" EXACT [OBOL:automatic]
"bowel organ mucosa" EXACT [OBOL:automatic]
"intestine mucosa" EXACT []
"intestine mucosa of organ" EXACT [OBOL:automatic]
"intestine mucous membrane" EXACT [OBOL:automatic]
"intestine organ mucosa" EXACT [OBOL:automatic]
"mucosa of bowel" EXACT [OBOL:automatic]
"mucosa of intestine" EXACT []
"mucosa of organ of bowel" EXACT [OBOL:automatic]
"mucosa of organ of intestine" EXACT [OBOL:automatic]
"mucous membrane of bowel" EXACT [OBOL:automatic]
"mucous membrane of intestine" EXACT [OBOL:automatic]
"organ mucosa of bowel" EXACT [OBOL:automatic]
"organ mucosa of intestine" EXACT [OBOL:automatic]
Alt_id: UBERON:FMA_15695-MA_0001537
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004786(gastrointestinal system mucosa)
part_of:UBERON:0000160(intestine),UBERON:0001262(wall of intestine)



Children

is a:UBERON:0001204 (mucosa of small intestine)
derives from:FF:0011436 (mouse intestinal mucosa- adult sample)
part of:UBERON:0000333 (intestinal gland),UBERON:0001204 (mucosa of small intestine),UBERON:0001277 (intestinal epithelium),UBERON:0001983 (crypt of Lieberkuhn)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001242 (intestinal mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data