UBERON:0002036
From FANTOM5_SSTAR
| Name: | striated muscle tissue | |
|---|---|---|
| Definition: | "Tissue which consists of striated muscle fibers surrounded by endomysium. Examples: Skeletal muscle tissue, Cardiac muscle tissue[FMA]." [FMA:67905, Wikipedia:Striated_muscle] | |
| Xrefs: |
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| Synonyms: | "striated muscle" EXACT [] | |
| Alt_id: | UBERON:FMA_67905-MA_0002438 | |
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002385(muscle tissue) |
|---|
Children
| is a: | UBERON:0001133 (cardiac muscle tissue),UBERON:0001134 (skeletal muscle tissue) |
|---|---|
| disjoint from: | UBERON:0001135 (smooth muscle tissue) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10023-101D5 (skeletal muscle, adult, pool1)
- 10066-101I3 (skeletal muscle, fetal, donor1)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10094-102C4
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10300-104H3
- 10310-104I4
- 10328-105B4
- 10338-105C5
... further results Mouse (Mus musculus)
- 10023-101D5 (skeletal muscle, adult, pool1)
- 10066-101I3 (skeletal muscle, fetal, donor1)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10094-102C4
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10300-104H3
- 10310-104I4
- 10328-105B4
- 10338-105C5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002036 (striated muscle tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
