Personal tools

UBERON:0002213

From FANTOM5_SSTAR

Revision as of 10:57, 24 February 2012 by Autoedit (talk | contribs) (Created page with "{{UBERON |id=UBERON:0002213 |name=cartilaginous joint |namespace= |def="Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Example...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:cartilaginous joint
Definition:"Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Examples: Spheno-occipital synchondrosis, first sternocostal joint, pubic symphysis.[FMA]" [FMA:FMA, Wikipedia:Cartilaginous_joint]
Xrefs:
links:

FMA:7496
MA:0000320
SCTID:58442004

ZFA:0005155
Synonyms: "articulatio cartilaginea" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7496-MA_0000320
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000982(skeletal joint)



Children

is a:UBERON:0002216 (symphysis)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002213 (cartilaginous joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.25e-162FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_b704d0b3d63e6c8897c2b0cd9d85ec03p@chr3:174737010..174737023, +
1.25e-162FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_b704d0b3d63e6c8897c2b0cd9d85ec03p@chr3:174737010..174737023, +
3.92e-140FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_6222a5370420751300f61cdc2eaef3f3p4@PAX1
3.92e-140FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_6222a5370420751300f61cdc2eaef3f3p4@PAX1
4.22e-99FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_cbcac99dab9b90433d9f562674fe8d6fp@chr5:30104176..30104187, -
4.22e-99FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_cbcac99dab9b90433d9f562674fe8d6fp@chr5:30104176..30104187, -
1.06e-78FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_79afdd82f4383b24f72f2b6a3a7691d7p4@NKX3-2
1.06e-78FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_79afdd82f4383b24f72f2b6a3a7691d7p4@NKX3-2
2.52e-71FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_e850a82c1db3bf5867750df34365ac86p@chr9:114135497..114135526, -
2.52e-71FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_e850a82c1db3bf5867750df34365ac86p@chr9:114135497..114135526, -
7.4e-71FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_3e498a537466458a8f2cb4dcff473fd6p@chr2:241897125..241897142, -
7.4e-71FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_3e498a537466458a8f2cb4dcff473fd6p@chr2:241897125..241897142, -
6.33e-70FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_4a62d7046aae9c905f14d5b3148afa95p@chr3:80727046..80727051, -
6.33e-70FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_4a62d7046aae9c905f14d5b3148afa95p@chr3:80727046..80727051, -
4.8e-67FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_dd04d3cba19b62a59e47db6f5daf5257p15@SNED1
4.8e-67FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_dd04d3cba19b62a59e47db6f5daf5257p15@SNED1
1.24e-66FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_7c8608b767417b5490bd8cae7788305bp20@CAPZB
1.24e-66FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_7c8608b767417b5490bd8cae7788305bp20@CAPZB
1.26e-62FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_06e55f9c7a7a1ecdf981d8eacda8a6e5p@chr1:19778678..19778689, -
1.26e-62FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_06e55f9c7a7a1ecdf981d8eacda8a6e5p@chr1:19778678..19778689, -
1.1e-59FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_271ba27101196c8e81fa485dca69fc95p@chr2:241897189..241897221, -
1.1e-59FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_271ba27101196c8e81fa485dca69fc95p@chr2:241897189..241897221, -
1.55e-57FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_5f73f14f4b5b13d585f173a9e7187b8cp1@uc010aki.1
1.55e-57FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_5f73f14f4b5b13d585f173a9e7187b8cp1@uc010aki.1
4.09e-56FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_a8c14f621ec3aec83716ebe513cf040ap6@SIX4
4.09e-56FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_a8c14f621ec3aec83716ebe513cf040ap6@SIX4
3.74e-53FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_18edbcd6eb5672e7f461d57482ba1f35p3@uc010aki.1
3.74e-53FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_18edbcd6eb5672e7f461d57482ba1f35p3@uc010aki.1
1.15e-51FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_ce37c316706413bc30f9f93fa23ead9ap3@PAX1
1.15e-51FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_ce37c316706413bc30f9f93fa23ead9ap3@PAX1
2.3e-51FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_5ff3f3a1d6c62973b555ebec7588384bp@chr10:81923378..81923389, -
2.3e-51FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_5ff3f3a1d6c62973b555ebec7588384bp@chr10:81923378..81923389, -
3.24e-51FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_cc5e7e366a9e0ad41b022b98e51f5dc4p@chr2:12248310..12248334, -
3.24e-51FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_cc5e7e366a9e0ad41b022b98e51f5dc4p@chr2:12248310..12248334, -
8.0e-51FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_8e7221664346c81f8b0f938463f5dfeap19@HDAC9
8.0e-51FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_8e7221664346c81f8b0f938463f5dfeap19@HDAC9
5.06e-49FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_e51819817a198ea7a3314f63ba8141c7p@chr7:158224707..158224729, -
5.06e-49FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_e51819817a198ea7a3314f63ba8141c7p@chr7:158224707..158224729, -
5.24e-48FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_0e9ed012f93f9e984d2a68dce53c9346p@chr1:65888177..65888194, +
5.24e-48FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_0e9ed012f93f9e984d2a68dce53c9346p@chr1:65888177..65888194, +
2.98e-45FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_130222f2c0da81cf8682b6d73289f0b1p3@NKX3-2
2.98e-45FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_130222f2c0da81cf8682b6d73289f0b1p3@NKX3-2
2.92e-44FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_d63fbd51890becd85955338938c58668p1@MGC27382
2.92e-44FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_d63fbd51890becd85955338938c58668p1@MGC27382
1.71e-43FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_aab4a693b6feb8c16d293aeadfef5076p18@HDAC9
1.71e-43FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_aab4a693b6feb8c16d293aeadfef5076p18@HDAC9
1.48e-40FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_1dcdeb96b99c13343f148d15d73c0060p@chr13:24914614..24914622, -
1.48e-40FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_1dcdeb96b99c13343f148d15d73c0060p@chr13:24914614..24914622, -
1.48e-40FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_1dcdeb96b99c13343f148d15d73c0060p@chr9:33028063..33028067, -
1.48e-40FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_1dcdeb96b99c13343f148d15d73c0060p@chr9:33028063..33028067, -
1.64e-40FFCP PHASE1:Hg19::chr20:21686317..21686350,+#_a38ae35a52b188433c0880c59958102cp1@PAX1
1.64e-40FFCP PHASE2:Hg19::chr20:21686317..21686350,+#_a38ae35a52b188433c0880c59958102cp1@PAX1
1.81e-40FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_4514e777bbbe011bd3d756b9c761e139p5@PTGFR
1.81e-40FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_4514e777bbbe011bd3d756b9c761e139p5@PTGFR
2.13e-40FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_b0ad7eee6dcffeba22b4e4c09ff877c4p@chr2:241897363..241897398, +
2.13e-40FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_b0ad7eee6dcffeba22b4e4c09ff877c4p@chr2:241897363..241897398, +
3.04e-39FFCP PHASE1:Hg19::chr20:21686290..21686311,+#_fedce8696603c8f08a36ef9dce957b2fp2@PAX1
3.04e-39FFCP PHASE2:Hg19::chr20:21686290..21686311,+#_fedce8696603c8f08a36ef9dce957b2fp2@PAX1
7.19e-39FFCP PHASE1:Hg19::chr7:18832759..18832786,+#_3af5f3234befbde9f24354abd1091390p16@HDAC9
7.19e-39FFCP PHASE2:Hg19::chr7:18832759..18832786,+#_3af5f3234befbde9f24354abd1091390p16@HDAC9
7.19e-39FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_3af5f3234befbde9f24354abd1091390p@chr5:140887761..140887777, +
7.19e-39FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_3af5f3234befbde9f24354abd1091390p@chr5:140887761..140887777, +
1.24e-38FFCP PHASE2:Hg19::chr4:77068930..77068959,-#_d498fb9cde6ebefd7bd8b6b00ee664a3p4@NUP54
1.24e-38FFCP PHASE1:Hg19::chr4:77068930..77068959,-#_d498fb9cde6ebefd7bd8b6b00ee664a3p4@NUP54
2.08e-38FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_0294de9ca901857ff7eea169825d86e7p@chr2:241938405..241938416, +
2.08e-38FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_0294de9ca901857ff7eea169825d86e7p@chr2:241938405..241938416, +
3.34e-38FFCP PHASE2:Hg19::chr4:13546632..13546662,-#_d69c61e31799ad1d70d8826e10125a72p1@NKX3-2
3.34e-38FFCP PHASE1:Hg19::chr4:13546632..13546662,-#_d69c61e31799ad1d70d8826e10125a72p1@NKX3-2
3.68e-38FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_1d44aa34895ac3eb0ee270b40c53623dp10@SYNJ2
3.68e-38FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_1d44aa34895ac3eb0ee270b40c53623dp10@SYNJ2
5.39e-38FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_000612681434dc3bfad37c05e58fff24p@chr9:16138889..16138902, -
5.39e-38FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_000612681434dc3bfad37c05e58fff24p@chr9:16138889..16138902, -
8.66e-38FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_e7a0f77166265d51ee3f126254a4da04p2@ENST00000518706
8.66e-38FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_e7a0f77166265d51ee3f126254a4da04p2@ENST00000518706
2.96e-37FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_d3087195817cc3f4afd62232b8bde7dap1@ENST00000436845
2.96e-37FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_d3087195817cc3f4afd62232b8bde7dap1@ENST00000436845
6.92e-37FFCP PHASE2:Hg19::chr9:123239747..123239765,-#_b367902a56ceb588e7d3f4341c738f7dp12@CDK5RAP2
6.92e-37FFCP PHASE1:Hg19::chr9:123239747..123239765,-#_b367902a56ceb588e7d3f4341c738f7dp12@CDK5RAP2
3.28e-36FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_0cc299e3779dc21d44d16618b70914cdp1@ENST00000413519
3.28e-36FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_0cc299e3779dc21d44d16618b70914cdp1@ENST00000413519
9.62e-35FFCP PHASE1:Hg19::chr14:37126814..37126834,+#_074b46a530c1936972defb44a639fd21p4@PAX9
9.62e-35FFCP PHASE2:Hg19::chr14:37126814..37126834,+#_074b46a530c1936972defb44a639fd21p4@PAX9
1.8e-34FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_2b324352ad8b9956c045bc1dd115d83bp@chr7:100202784..100202796, -
1.8e-34FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_2b324352ad8b9956c045bc1dd115d83bp@chr7:100202784..100202796, -
3.69e-34FFCP PHASE2:Hg19::chr12:54422268..54422278,+#_8115095d6791064635f742872ce213fep8@HOXC6
3.69e-34FFCP PHASE1:Hg19::chr12:54422268..54422278,+#_8115095d6791064635f742872ce213fep8@HOXC6
5.52e-34FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_28278431e313aeef9423b09931ddedb1p6@CCDC86
5.52e-34FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_28278431e313aeef9423b09931ddedb1p6@CCDC86
1.43e-33FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_71eaef78e75b0bb5db9deba9fb7dbde1p@chr20:21695435..21695452, +
1.43e-33FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_71eaef78e75b0bb5db9deba9fb7dbde1p@chr20:21695435..21695452, +
5.36e-33FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_a896b1d3466d3d1b9148615f66826661p@chr16:70795228..70795237, +
5.36e-33FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_a896b1d3466d3d1b9148615f66826661p@chr16:70795228..70795237, +
1.05e-32FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_e8d48f88a6c7259fdabcf8fb47601016p@chr3:158384350..158384362, -
1.05e-32FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_e8d48f88a6c7259fdabcf8fb47601016p@chr3:158384350..158384362, -
1.7e-32FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_ea3039584e41f7726502745c5edf4b58p9@CYTIP
1.7e-32FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_ea3039584e41f7726502745c5edf4b58p9@CYTIP
2.34e-32FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_3efccf293b705a5383e4b42be489be12p@chr18:12012068..12012098, +
2.34e-32FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_3efccf293b705a5383e4b42be489be12p@chr18:12012068..12012098, +
2.79e-31FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_6ee1389d8b42f1d0feacbc6b040e946ap1@ENST00000555639
2.79e-31FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_6ee1389d8b42f1d0feacbc6b040e946ap1@ENST00000555639

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002213&oldid=414841"