FFCP PHASE2:Hg19::chr10:88718314..88718388,+
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Short description: | p1@SNCG |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNCG_5end |
Coexpression cluster: | C3054_mature_locus_thalamus_pons_amygdala_diencephalon_hippocampus |
Association with transcript: | 0bp_to_ENST00000348795, ENST00000465679_5end |
EntrezGene: | SNCG |
HGNC: | 11141 |
UniProt: | F8W754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SNCG |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell of vascular tree | 1.53e-10 | 24 |
endothelial cell | 6.30e-10 | 36 |
blood vessel endothelial cell | 3.00e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.00e-08 | 18 |
meso-epithelial cell | 3.74e-08 | 45 |
mesodermal cell | 6.37e-07 | 121 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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adult organism | 4.27e-33 | 114 |
anatomical conduit | 3.45e-32 | 240 |
tube | 4.26e-26 | 192 |
epithelium | 1.50e-25 | 306 |
cell layer | 2.10e-25 | 309 |
neural tube | 1.81e-22 | 56 |
neural rod | 1.81e-22 | 56 |
future spinal cord | 1.81e-22 | 56 |
neural keel | 1.81e-22 | 56 |
neural plate | 1.50e-21 | 82 |
Showing 1 to 10 of 68 entries