FFCP PHASE2:Mm9::chr17:27693865..27693877,+
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Short description: | p8@Hmga1-rs1, p9@Hmga1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Hmga1-rs1_5end, CAGE_peak_9_at_Hmga1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 252bp_to_ENSMUST00000117254, ENSMUST00000118570_5end |
EntrezGene: | 111241,15361 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@Hmga1-rs1p9@Hmga1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 1.23e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-11 | 23 |
neuron | 1.06e-07 | 33 |
neuronal stem cell | 1.06e-07 | 33 |
neuroblast | 1.06e-07 | 33 |
electrically signaling cell | 1.06e-07 | 33 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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regional part of nervous system | 6.76e-21 | 54 |
neurectoderm | 7.40e-21 | 64 |
neural plate | 7.40e-21 | 64 |
presumptive neural plate | 7.40e-21 | 64 |
structure with developmental contribution from neural crest | 1.46e-19 | 92 |
neural tube | 3.88e-19 | 52 |
neural rod | 3.88e-19 | 52 |
future spinal cord | 3.88e-19 | 52 |
neural keel | 3.88e-19 | 52 |
nervous system | 8.02e-19 | 75 |
Showing 1 to 10 of 38 entries