CL:0000540
From FANTOM5_SSTAR
Name: | neuron | |
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Namespace: | cell | |
Definition: | "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system." [MESH:A.08.663, MESH:D009474] | |
Xrefs: |
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Synonyms: | "nerve cell" EXACT [] | |
Comments: | These cells are also reportedly CD4-negative and CD200-positive. They are also capable of producing CD40L and IFN-gamma. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000393(electrically responsive cell),CL:0000404(electrically signaling cell),CL:0002319(neural cell) |
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develops_from: | CL:0000031(neuroblast) |
Children
is a: | CL:0000107 (autonomic neuron),CL:0000526 (afferent neuron),CL:2000029 (central nervous system neuron) |
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derives from: | FF:0000203 (mouse neuron samples),FF:0000348 (human neuron samples),FF:0200005 (iPS differentiation to neuron sample),FF:0200030 (neurons - spiral ganglion sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11489-119E4 (Mouse Neurons - substantia nigra, donor4)
- 11490-119E5 (Mouse Neurons - substantia nigra, donor5)
- 11494-119E9 (Neurons, donor1)
- 11495-119F1
- 11574-120E8 (Neurons, donor2)
- 11575-120E9
- 11636-122C7 (Mouse Granule cells, donor3)
- 11642-122D4
- 11643-122D5 (Mouse Neurons - dorsal spinal cord, donor3)
- 11644-122D6 (Mouse Neurons - hippocampal, donor3)
... further results Mouse (Mus musculus)
- 11489-119E4 (Mouse Neurons - substantia nigra, donor4)
- 11490-119E5 (Mouse Neurons - substantia nigra, donor5)
- 11494-119E9 (Neurons, donor1)
- 11495-119F1
- 11574-120E8 (Neurons, donor2)
- 11575-120E9
- 11636-122C7 (Mouse Granule cells, donor3)
- 11642-122D4
- 11643-122D5 (Mouse Neurons - dorsal spinal cord, donor3)
- 11644-122D6 (Mouse Neurons - hippocampal, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000540 (neuron), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data