CL:0000624
From FANTOM5_SSTAR
Name: | CD4-positive, alpha-beta T cell |
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Namespace: | cell |
Definition: | "A mature alpha-beta T cell that expresses an alpha-beta T cell receptor and the CD4 coreceptor." [GOC:add, ISBN:0781735149] |
Synonyms: |
"CD4-positive, alpha-beta T lymphocyte" EXACT [] "CD4-positive, alpha-beta T-cell" EXACT [] "CD4-positive, alpha-beta T-lymphocyte" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000791(mature alpha-beta T cell) |
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disjoint_from: | CL:0000625(CD8-positive, alpha-beta T cell) |
Children
is a: | CL:0000792 (CD4-positive, CD25-positive, alpha-beta regulatory T cell),CL:0000895 (naive thymus-derived CD4-positive, alpha-beta T cell),CL:0000896 (activated CD4-positive, alpha-beta T cell),CL:0000897 (CD4-positive, alpha-beta memory T cell),CL:0002436 (mature CD4 single-positive thymocyte) |
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derives from: | FF:0000031 (CD4-positive T cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11225-116C1 (CD4+ T Cells, donor1)
- 11306-117C1 (CD4+ T Cells, donor2)
- 11382-118B5 (CD4+ T Cells, donor3)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11786-124B4 (CD4+CD25-CD45RA- memory conventional T cells, donor1)
- 11813-124E4 (CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J))
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11815-124E6 (CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J))
- 11816-124E7 (CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J))
... further results Mouse (Mus musculus)
- 11225-116C1 (CD4+ T Cells, donor1)
- 11306-117C1 (CD4+ T Cells, donor2)
- 11382-118B5 (CD4+ T Cells, donor3)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11786-124B4 (CD4+CD25-CD45RA- memory conventional T cells, donor1)
- 11813-124E4 (CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J))
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11815-124E6 (CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J))
- 11816-124E7 (CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000624 (CD4-positive, alpha-beta T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data