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CL:0002494

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Name:cardiocyte
Namespace:cell
Definition:"A cell located in the heart, including both muscle and non muscle cells." [GOC:tfm]
Xrefs:
links:

BTO:0001539

FMA:83808
Synonyms: "heart cell" EXACT []
Comments:From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.
Created by:tmeehan
Creation date:2010-12-07T09:37:22Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000548(animal cell),CL:0002371(somatic cell)
part_of:UBERON:0000948(heart)



Children


is a:CL:0000513 (cardiac muscle myoblast),CL:0000569 (cardiac mesenchymal cell),CL:0000746 (cardiac muscle cell),CL:0002548 (cardiac fibroblast),CL:0002592 (smooth muscle cell of the coronary artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002494 (cardiocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data