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CL:0000307

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Name:tracheal epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell found in the trachea." [GOC:tfm]
Xrefs:
links:

FBbt:00005038

FMA:74793
Synonyms: "tracheocyte" EXACT []
Alt_id: CL:1000474


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0002202(epithelial cell of tracheobronchial tree)
develops_from:CL:0000377(tracheoblast)
part_of:UBERON:0003126(trachea)



Children


derives from:FF:0000189 (human tracheal epithelial cell sample),FF:0000645 (tracheal ciliated cell differentiation sample),FF:0000652 (tracheal ciliated cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11292-117A5 (Tracheal Epithelial Cells, donor1)
  • 11369-118A1 (Tracheal Epithelial Cells, donor2)
  • 11441-118I1 (Tracheal Epithelial Cells, donor3)
  • 13367-143G1 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13368-143G2 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13369-143G3 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13370-143G4 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13371-143G5 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13372-143G6 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13373-143G7 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)

... further results Mouse (Mus musculus)

  • 11292-117A5 (Tracheal Epithelial Cells, donor1)
  • 11369-118A1 (Tracheal Epithelial Cells, donor2)
  • 11441-118I1 (Tracheal Epithelial Cells, donor3)
  • 13367-143G1 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13368-143G2 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13369-143G3 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13370-143G4 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13371-143G5 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13372-143G6 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)
  • 13373-143G7 (Tracheal epithelial cells, differentiation to ciliated epithelial cells)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000307 (tracheal epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data