CL:0000682
From FANTOM5_SSTAR
| Name: | M cell of gut | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "An absorptive cell of the gut epithelium that endocytoses microorganisms and intact macromolecules from the gut lumen and transports them to the subepithelial space where they are presented to antigen-presenting cells and lymphocytes." [GOC:jb, GOC:tfm] | |
| Xrefs: |
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| Synonyms: |
"M-cell" EXACT [] "microfold cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000473(defensive cell),CL:0000627(transporting cell),CL:0002251(epithelial cell of alimentary canal) |
|---|---|
| part_of: | UBERON:0003929(gut epithelium) |
Children
| derives from: | FF:0011159 (mouse GP2-positive M cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11845-124H9 (GP2+ M cell, pool1)
- 11846-124I1 (GP2+ M cell, pool2)
- 11847-124I2 (GP2+ M cell, pool3)
Mouse (Mus musculus)
- 11845-124H9 (GP2+ M cell, pool1)
- 11846-124I1 (GP2+ M cell, pool2)
- 11847-124I2 (GP2+ M cell, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000682 (M cell of gut), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
