CL:0000775

Name:	neutrophil
Namespace:	FANTOM
Definition:	"Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [GOC:add, GOC:amm, GOC:tfm, ISBN:0721601464]
Xrefs:	Expandlinks: BTO:0000130 FMA:62860
Synonyms:	"neutrocyte" EXACT [] "neutrophil leucocyte" EXACT [] "neutrophil leukocyte" EXACT [] "neutrophilic leucocyte" EXACT [] "neutrophilic leukocyte" EXACT [] "PMN" BROAD [] "poly" BROAD [] "polymorphonuclear leucocyte" BROAD [] "polymorphonuclear leukocyte" BROAD [] "polymorphonuclear neutrophil" BROAD [] "polynuclear neutrophilic leucocyte" BROAD [] "polynuclear neutrophilic leukocyte" BROAD []

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000094(granulocyte)

Children

derives from:	FF:0000122 (human neutrophil sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11233-116C9 (Neutrophils, donor1)
• 11314-117C9 (Neutrophils, donor2)
• 11390-118C4 (Neutrophils, donor3)
• 12133-128D9 (neutrophil PMN, donor1)
• 12137-128E4 (neutrophil PMN, donor2)
• 12141-128E8 (neutrophil PMN, donor3)

Mouse (Mus musculus)

• 11233-116C9 (Neutrophils, donor1)
• 11314-117C9 (Neutrophils, donor2)
• 11390-118C4 (Neutrophils, donor3)
• 12133-128D9 (neutrophil PMN, donor1)
• 12137-128E4 (neutrophil PMN, donor2)
• 12141-128E8 (neutrophil PMN, donor3)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000775 (neutrophil), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
2.79e-195	FFCP PHASE1:Hg19::chr1:17418980..17418990,-	p@chr1:17418980..17418990, -
2.79e-195	FFCP PHASE1:Hg19::chr7:149462556..149462563,-	p@chr7:149462556..149462563, -
2.79e-195	FFCP PHASE2:Hg19::chr7:149462556..149462563,-	p@chr7:149462556..149462563, -
2.79e-195	FFCP PHASE2:Hg19::chr1:17418980..17418990,-	p@chr1:17418980..17418990, -
2.79e-195	FFCP PHASE1:Hg19::chr2:102608625..102608637,-	p@chr2:102608625..102608637, -
2.79e-195	FFCP PHASE2:Hg19::chr2:102608625..102608637,-	p@chr2:102608625..102608637, -
3.27e-147	FFCP PHASE1:Hg19::chr2:103043089..103043100,+	p@chr2:103043089..103043100, +
3.27e-147	FFCP PHASE1:Hg19::chr7:105904960..105904973,-	p@chr7:105904960..105904973, -
3.27e-147	FFCP PHASE2:Hg19::chr7:105917805..105917815,-	p@chr7:105917805..105917815, -
3.27e-147	FFCP PHASE1:Hg19::chr7:105917805..105917815,-	p@chr7:105917805..105917815, -
3.27e-147	FFCP PHASE1:Hg19::chr8:142317989..142317992,-	p@chr8:142317989..142317992, -
3.27e-147	FFCP PHASE2:Hg19::chr7:105904960..105904973,-	p@chr7:105904960..105904973, -
3.27e-147	FFCP PHASE1:Hg19::chr7:105921112..105921121,-	p@chr7:105921112..105921121, -
3.27e-147	FFCP PHASE2:Hg19::chr7:112062506..112062509,+	p@chr7:112062506..112062509, +
3.27e-147	FFCP PHASE1:Hg19::chr6:11360439..11360452,-	p@chr6:11360439..11360452, -
3.27e-147	FFCP PHASE2:Hg19::chr2:70274655..70274660,-	p@chr2:70274655..70274660, -
3.27e-147	FFCP PHASE2:Hg19::chr2:103043089..103043100,+	p@chr2:103043089..103043100, +
3.27e-147	FFCP PHASE1:Hg19::chr10:89648443..89648447,+	p@chr10:89648443..89648447, +
3.27e-147	FFCP PHASE1:Hg19::chr7:105903055..105903058,-	p@chr7:105903055..105903058, -
3.27e-147	FFCP PHASE2:Hg19::chr6:11351100..11351118,-	p@chr6:11351100..11351118, -
3.27e-147	FFCP PHASE2:Hg19::chr7:105921112..105921121,-	p@chr7:105921112..105921121, -
3.27e-147	FFCP PHASE2:Hg19::chr7:105903055..105903058,-	p@chr7:105903055..105903058, -
3.27e-147	FFCP PHASE2:Hg19::chr8:142317989..142317992,-	p@chr8:142317989..142317992, -
3.27e-147	FFCP PHASE1:Hg19::chr7:105917431..105917440,-	p@chr7:105917431..105917440, -
3.27e-147	FFCP PHASE1:Hg19::chr6:11332062..11332081,-	p@chr6:11332062..11332081, -
3.27e-147	FFCP PHASE2:Hg19::chr10:89648443..89648447,+	p@chr10:89648443..89648447, +
3.27e-147	FFCP PHASE1:Hg19::chr2:70274655..70274660,-	p@chr2:70274655..70274660, -
3.27e-147	FFCP PHASE1:Hg19::chr6:11351100..11351118,-	p@chr6:11351100..11351118, -
3.27e-147	FFCP PHASE2:Hg19::chr6:11332062..11332081,-	p@chr6:11332062..11332081, -
3.27e-147	FFCP PHASE2:Hg19::chr7:105917431..105917440,-	p@chr7:105917431..105917440, -
3.27e-147	FFCP PHASE1:Hg19::chr7:112062506..112062509,+	p@chr7:112062506..112062509, +
3.27e-147	FFCP PHASE2:Hg19::chr6:11360439..11360452,-	p@chr6:11360439..11360452, -
5.41e-147	FFCP PHASE1:Hg19::chr7:112062482..112062489,+	p@chr7:112062482..112062489, +
5.41e-147	FFCP PHASE2:Hg19::chr7:112062482..112062489,+	p@chr7:112062482..112062489, +
8.93e-147	FFCP PHASE2:Hg19::chr1:21904038..21904043,+	p@chr1:21904038..21904043, +
8.93e-147	FFCP PHASE1:Hg19::chr21:35570862..35570865,+	p@chr21:35570862..35570865, +
8.93e-147	FFCP PHASE1:Hg19::chr3:134309990..134309996,-	p@chr3:134309990..134309996, -
8.93e-147	FFCP PHASE2:Hg19::chr3:134309990..134309996,-	p@chr3:134309990..134309996, -
8.93e-147	FFCP PHASE2:Hg19::chr21:35570862..35570865,+	p@chr21:35570862..35570865, +
8.93e-147	FFCP PHASE1:Hg19::chr1:21904038..21904043,+	p@chr1:21904038..21904043, +
1.47e-146	FFCP PHASE1:Hg19::chr17:57785324..57785365,+	p@chr17:57785324..57785365, +
1.47e-146	FFCP PHASE2:Hg19::chr17:57785324..57785365,+	p@chr17:57785324..57785365, +
8.98e-131	FFCP PHASE2:Hg19::chr2:121011894..121011895,-	p@chr2:121011894..121011895, -
8.98e-131	FFCP PHASE1:Hg19::chr2:121011894..121011895,-	p@chr2:121011894..121011895, -
2.33e-118	FFCP PHASE2:Hg19::chr20:1545770..1545777,-	p@chr20:1545770..1545777, -
2.33e-118	FFCP PHASE1:Hg19::chr1:208712283..208712291,+	p@chr1:208712283..208712291, +
2.33e-118	FFCP PHASE1:Hg19::chr20:1545770..1545777,-	p@chr20:1545770..1545777, -
2.33e-118	FFCP PHASE1:Hg19::chr2:143908003..143908010,-	p@chr2:143908003..143908010, -
2.33e-118	FFCP PHASE2:Hg19::chr8:97657886..97657892,+	p@chr8:97657886..97657892, +
2.33e-118	FFCP PHASE1:Hg19::chr7:112062470..112062479,+	p@chr7:112062470..112062479, +
2.33e-118	FFCP PHASE2:Hg19::chr7:105917490..105917499,-	p@chr7:105917490..105917499, -
2.33e-118	FFCP PHASE2:Hg19::chr7:102071349..102071355,-	p@chr7:102071349..102071355, -
2.33e-118	FFCP PHASE1:Hg19::chr7:105917490..105917499,-	p@chr7:105917490..105917499, -
2.33e-118	FFCP PHASE2:Hg19::chr2:143908003..143908010,-	p@chr2:143908003..143908010, -
2.33e-118	FFCP PHASE2:Hg19::chr16:3107107..3107117,+	p@chr16:3107107..3107117, +
2.33e-118	FFCP PHASE2:Hg19::chr7:112062470..112062479,+	p@chr7:112062470..112062479, +
2.33e-118	FFCP PHASE1:Hg19::chr20:55012583..55012585,+	p@chr20:55012583..55012585, +
2.33e-118	FFCP PHASE1:Hg19::chr6:11313936..11313940,-	p@chr6:11313936..11313940, -
2.33e-118	FFCP PHASE1:Hg19::chr16:3107107..3107117,+	p@chr16:3107107..3107117, +
2.33e-118	FFCP PHASE2:Hg19::chr1:208712283..208712291,+	p@chr1:208712283..208712291, +
2.33e-118	FFCP PHASE1:Hg19::chr8:97657886..97657892,+	p@chr8:97657886..97657892, +
2.33e-118	FFCP PHASE2:Hg19::chr20:55012583..55012585,+	p@chr20:55012583..55012585, +
2.33e-118	FFCP PHASE2:Hg19::chr19:14774330..14774343,-	p@chr19:14774330..14774343, -
2.33e-118	FFCP PHASE1:Hg19::chr7:102071349..102071355,-	p@chr7:102071349..102071355, -
2.33e-118	FFCP PHASE2:Hg19::chr1:36938272..36938282,-	p35@CSF3R
2.33e-118	FFCP PHASE2:Hg19::chr6:11313936..11313940,-	p@chr6:11313936..11313940, -
2.33e-118	FFCP PHASE1:Hg19::chr1:36938272..36938282,-	p35@CSF3R
2.33e-118	FFCP PHASE1:Hg19::chr19:14774330..14774343,-	p@chr19:14774330..14774343, -
3.48e-118	FFCP PHASE1:Hg19::chr20:56861864..56861875,-	p@chr20:56861864..56861875, -
3.48e-118	FFCP PHASE2:Hg19::chr2:120967895..120967903,-	p@chr2:120967895..120967903, -
3.48e-118	FFCP PHASE2:Hg19::chr20:56861880..56861893,-	p@chr20:56861880..56861893, -
3.48e-118	FFCP PHASE2:Hg19::chr20:56861864..56861875,-	p@chr20:56861864..56861875, -
3.48e-118	FFCP PHASE1:Hg19::chr2:120967895..120967903,-	p@chr2:120967895..120967903, -
3.48e-118	FFCP PHASE1:Hg19::chr20:56861880..56861893,-	p@chr20:56861880..56861893, -
5.2e-118	FFCP PHASE2:Hg19::chr2:103039548..103039555,+	p9@IL18RAP
5.2e-118	FFCP PHASE2:Hg19::chr8:97669948..97669957,+	p@chr8:97669948..97669957, +
5.2e-118	FFCP PHASE2:Hg19::chr17:80187468..80187472,+	p@chr17:80187468..80187472, +
5.2e-118	FFCP PHASE2:Hg19::chr12:8720206..8720211,-	p4@ENST00000542819
5.2e-118	FFCP PHASE1:Hg19::chr12:8720206..8720211,-	p4@ENST00000542819
5.2e-118	FFCP PHASE1:Hg19::chr8:97669948..97669957,+	p@chr8:97669948..97669957, +
5.2e-118	FFCP PHASE1:Hg19::chr2:103039548..103039555,+	p9@IL18RAP
5.2e-118	FFCP PHASE1:Hg19::chr1:27155357..27155367,+	p@chr1:27155357..27155367, +
5.2e-118	FFCP PHASE2:Hg19::chr1:27155357..27155367,+	p@chr1:27155357..27155367, +
5.2e-118	FFCP PHASE1:Hg19::chr2:103039589..103039596,+	p8@IL18RAP
5.2e-118	FFCP PHASE1:Hg19::chr17:80187468..80187472,+	p@chr17:80187468..80187472, +
5.2e-118	FFCP PHASE2:Hg19::chr2:103039589..103039596,+	p8@IL18RAP
7.78e-118	FFCP PHASE1:Hg19::chr13:21050019..21050027,-	p@chr13:21050019..21050027, -
7.78e-118	FFCP PHASE2:Hg19::chr13:21050019..21050027,-	p@chr13:21050019..21050027, -
7.78e-118	FFCP PHASE2:Hg19::chr14:88469399..88469404,-	p@chr14:88469399..88469404, -
7.78e-118	FFCP PHASE1:Hg19::chr14:88469399..88469404,-	p@chr14:88469399..88469404, -
1.16e-117	FFCP PHASE1:Hg19::chr1:208712347..208712354,+	p@chr1:208712347..208712354, +
1.16e-117	FFCP PHASE2:Hg19::chr21:37502917..37502925,+	p5@MEMO1P1
1.16e-117	FFCP PHASE2:Hg19::chr2:120967889..120967892,-	p@chr2:120967889..120967892, -
1.16e-117	FFCP PHASE1:Hg19::chr21:37502917..37502925,+	p5@MEMO1P1
1.16e-117	FFCP PHASE2:Hg19::chr1:208712347..208712354,+	p@chr1:208712347..208712354, +
1.16e-117	FFCP PHASE2:Hg19::chr2:102618480..102618529,+	p11@IL1R2
1.16e-117	FFCP PHASE2:Hg19::chr2:70246139..70246146,-	p@chr2:70246139..70246146, -
1.16e-117	FFCP PHASE1:Hg19::chr2:70246139..70246146,-	p@chr2:70246139..70246146, -
1.16e-117	FFCP PHASE2:Hg19::chr2:103106370..103106380,+	p@chr2:103106370..103106380, +
1.16e-117	FFCP PHASE1:Hg19::chr2:102618480..102618529,+	p11@IL1R2

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