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CL:0000894

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Name:DN1 thymic pro-T cell
Namespace:FANTOM
Definition:"A pro-T cell that has the phenotype CD4-negative, CD8-negative, CD44-positive, and CD25-negative." [GO_REF:0000031, GOC:add, GOC:tfm]
Synonyms: "DN1 thymic pro-T lymphocyte" EXACT []
"DN1 thymic pro-T-cell" EXACT []
"DN1 thymic pro-T-lymphocyte" EXACT []
"DN1 thymic progenitor T cell" EXACT []
"DN1 thymocyte" EXACT []
"double negative 1" EXACT []
"preT.DN1.Th" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000827(pro-T cell)
develops_from:CL:0002425(early T lineage precursor)
part_of:UBERON:0002370(thymus)



Children


develops from:CL:0000806 (DN2 thymocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000894 (DN1 thymic pro-T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data