CL:0001024

Name:	CD34-positive, CD38-negative hematopoietic stem cell
Namespace:	FANTOM
Definition:	"CD133-positive hematopoietic stem cell is a hematopoietic stem cell that is CD34-positive, CD90-positive, and CD133-positive." [GO_REF:0000031, GOC:add, GOC:amm, GOC:tfm, PMID:10430905, PMID:11750107, PMID:16551251, PMID:20024907, PMID:9389721]
Xrefs:	Expandlinks: FMA:86475
Synonyms:	"CD133-positive hematopoietic stem cell" EXACT [PMID:16140871]
Comments:	Cell markers are associated with human hematopoietic stem cells. Originally described in the dendritic cell ontology (DC_CL:0000035)(PMID: 19243617).

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000037(hematopoietic stem cell)

Children

derives from:	FF:0000027 (human CD133-positive hematopoeitic stem cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11543-120B4
• 11623-122B3
• 11704-123B3
• 12223-129E9 (CD133+ stem cells - cord blood derived, pool1)
• 12224-129F1 (CD133+ stem cells - adult bone marrow derived, pool1)

Mouse (Mus musculus)

• 11543-120B4
• 11623-122B3
• 11704-123B3
• 12223-129E9 (CD133+ stem cells - cord blood derived, pool1)
• 12224-129F1 (CD133+ stem cells - adult bone marrow derived, pool1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0001024 (CD34-positive, CD38-negative hematopoietic stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
9.37e-99	FFCP PHASE1:Hg19::chr1:233430709..233430711,+	p@chr1:233430709..233430711, +
9.37e-99	FFCP PHASE2:Hg19::chr1:233430709..233430711,+	p@chr1:233430709..233430711, +
2.55e-98	FFCP PHASE1:Hg19::chr5:71883899..71883903,+	p@chr5:71883899..71883903, +
2.55e-98	FFCP PHASE2:Hg19::chr5:71883899..71883903,+	p@chr5:71883899..71883903, +
1.23e-66	FFCP PHASE2:Hg19::chr10:27742148..27742150,+	p@chr10:27742148..27742150, +
1.23e-66	FFCP PHASE1:Hg19::chr10:27742148..27742150,+	p@chr10:27742148..27742150, +
2.39e-66	FFCP PHASE1:Hg19::chr15:78594519..78594524,-	p@chr15:78594519..78594524, -
2.39e-66	FFCP PHASE2:Hg19::chr15:78594519..78594524,-	p@chr15:78594519..78594524, -
4.66e-66	FFCP PHASE2:Hg19::chr10:73830227..73830232,-	p26@SPOCK2
4.66e-66	FFCP PHASE1:Hg19::chr7:142245972..142246006,-	p1@TRBV8-2
4.66e-66	FFCP PHASE1:Hg19::chr10:73830227..73830232,-	p26@SPOCK2
4.66e-66	FFCP PHASE2:Hg19::chr7:142245972..142246006,-	p1@TRBV8-2
4.66e-66	FFCP PHASE1:Hg19::chr19:855581..855593,+	p4@ELANE
4.66e-66	FFCP PHASE2:Hg19::chr19:855581..855593,+	p4@ELANE
1.46e-50	FFCP PHASE1:Hg19::chr20:3064096..3064101,-	p@chr20:3064096..3064101, -
1.46e-50	FFCP PHASE2:Hg19::chr20:3064096..3064101,-	p@chr20:3064096..3064101, -
1.46e-50	FFCP PHASE1:Hg19::chr6:142702634..142702638,+	p@chr6:142702634..142702638, +
1.46e-50	FFCP PHASE2:Hg19::chr6:142702634..142702638,+	p@chr6:142702634..142702638, +
3.99e-50	FFCP PHASE2:Hg19::chr12:78870953..78870955,+	p@chr12:78870953..78870955, +
3.99e-50	FFCP PHASE2:Hg19::chr10:98066533..98066541,-	p@chr10:98066533..98066541, -
3.99e-50	FFCP PHASE1:Hg19::chr10:98066533..98066541,-	p@chr10:98066533..98066541, -
3.99e-50	FFCP PHASE2:Hg19::chr14:47722173..47722192,-	p@chr14:47722173..47722192, -
3.99e-50	FFCP PHASE1:Hg19::chr12:78870953..78870955,+	p@chr12:78870953..78870955, +
3.99e-50	FFCP PHASE1:Hg19::chr5:61874696..61874701,+	p3@LRRC70
3.99e-50	FFCP PHASE2:Hg19::chr5:61874696..61874701,+	p3@LRRC70
3.99e-50	FFCP PHASE1:Hg19::chr14:47722173..47722192,-	p@chr14:47722173..47722192, -
6.58e-50	FFCP PHASE1:Hg19::chr19:21861119..21861122,-	p@chr19:21861119..21861122, -
6.58e-50	FFCP PHASE2:Hg19::chr19:21861119..21861122,-	p@chr19:21861119..21861122, -
6.62e-41	FFCP PHASE1:Hg19::chr20:3064138..3064143,-	p@chr20:3064138..3064143, -
6.62e-41	FFCP PHASE2:Hg19::chr20:3064138..3064143,-	p@chr20:3064138..3064143, -
6.62e-41	FFCP PHASE1:Hg19::chr5:138728827..138728838,+	p@chr5:138728827..138728838, +
6.62e-41	FFCP PHASE2:Hg19::chr5:138728827..138728838,+	p@chr5:138728827..138728838, +
9.91e-41	FFCP PHASE1:Hg19::chr12:7622262..7622272,-	p@chr12:7622262..7622272, -
9.91e-41	FFCP PHASE1:Hg19::chr14:106733172..106733175,+	p1@AK126233
9.91e-41	FFCP PHASE1:Hg19::chr20:3064148..3064164,-	p@chr20:3064148..3064164, -
9.91e-41	FFCP PHASE2:Hg19::chr20:3064148..3064164,-	p@chr20:3064148..3064164, -
9.91e-41	FFCP PHASE2:Hg19::chr12:7622262..7622272,-	p@chr12:7622262..7622272, -
9.91e-41	FFCP PHASE1:Hg19::chr20:3064211..3064222,-	p@chr20:3064211..3064222, -
9.91e-41	FFCP PHASE2:Hg19::chr20:3064211..3064222,-	p@chr20:3064211..3064222, -
9.91e-41	FFCP PHASE2:Hg19::chr14:106733172..106733175,+	p1@AK126233
1.48e-40	FFCP PHASE2:Hg19::chr13:107448278..107448283,+	p@chr13:107448278..107448283, +
1.48e-40	FFCP PHASE1:Hg19::chr16:28914360..28914369,+	p@chr16:28914360..28914369, +
1.48e-40	FFCP PHASE2:Hg19::chr14:106331806..106331813,-	p2@IGHD7-27
1.48e-40	FFCP PHASE1:Hg19::chr13:107448278..107448283,+	p@chr13:107448278..107448283, +
1.48e-40	FFCP PHASE2:Hg19::chr16:28914360..28914369,+	p@chr16:28914360..28914369, +
1.48e-40	FFCP PHASE1:Hg19::chr14:106331806..106331813,-	p2@IGHD7-27
2.21e-40	FFCP PHASE2:Hg19::chr16:15776378..15776383,+	p@chr16:15776378..15776383, +
2.21e-40	FFCP PHASE2:Hg19::chr15:99819658..99819672,+	p@chr15:99819658..99819672, +
2.21e-40	FFCP PHASE1:Hg19::chr16:15776378..15776383,+	p@chr16:15776378..15776383, +
2.21e-40	FFCP PHASE1:Hg19::chr15:99819658..99819672,+	p@chr15:99819658..99819672, +
3.3e-40	FFCP PHASE2:Hg19::chr12:69754055..69754064,+	p@chr12:69754055..69754064, +
3.3e-40	FFCP PHASE1:Hg19::chr17:56357324..56357333,-	p@chr17:56357324..56357333, -
3.3e-40	FFCP PHASE2:Hg19::chr17:56357324..56357333,-	p@chr17:56357324..56357333, -
3.3e-40	FFCP PHASE1:Hg19::chr12:69754055..69754064,+	p@chr12:69754055..69754064, +
1.84e-34	FFCP PHASE1:Hg19::chr1:214614555..214614558,-	p@chr1:214614555..214614558, -
1.84e-34	FFCP PHASE2:Hg19::chr14:56683795..56683803,+	p@chr14:56683795..56683803, +
1.84e-34	FFCP PHASE2:Hg19::chr1:214614555..214614558,-	p@chr1:214614555..214614558, -
1.84e-34	FFCP PHASE1:Hg19::chr19:24009879..24009892,+	p2@RPSAP58
1.84e-34	FFCP PHASE2:Hg19::chr19:24009879..24009892,+	p2@RPSAP58
1.84e-34	FFCP PHASE1:Hg19::chr14:56683795..56683803,+	p@chr14:56683795..56683803, +
2.58e-34	FFCP PHASE2:Hg19::chr9:132807451..132807460,+	p@chr9:132807451..132807460, +
2.58e-34	FFCP PHASE1:Hg19::chr4:2916272..2916283,+	p38@ADD1
2.58e-34	FFCP PHASE2:Hg19::chr14:106332629..106332637,-	p@chr14:106332629..106332637, -
2.58e-34	FFCP PHASE2:Hg19::chr4:2916272..2916283,+	p38@ADD1
2.58e-34	FFCP PHASE1:Hg19::chr2:43424646..43424671,-	p@chr2:43424646..43424671, -
2.58e-34	FFCP PHASE1:Hg19::chr19:19972028..19972035,-	p@chr19:19972028..19972035, -
2.58e-34	FFCP PHASE2:Hg19::chr2:43424646..43424671,-	p@chr2:43424646..43424671, -
2.58e-34	FFCP PHASE2:Hg19::chr19:19972028..19972035,-	p@chr19:19972028..19972035, -
2.58e-34	FFCP PHASE1:Hg19::chr14:106332629..106332637,-	p@chr14:106332629..106332637, -
2.58e-34	FFCP PHASE1:Hg19::chr9:132807451..132807460,+	p@chr9:132807451..132807460, +
3.61e-34	FFCP PHASE2:Hg19::chr15:50367664..50367673,-	p@chr15:50367664..50367673, -
3.61e-34	FFCP PHASE1:Hg19::chr15:50367664..50367673,-	p@chr15:50367664..50367673, -
3.61e-34	FFCP PHASE1:Hg19::chr14:106332598..106332607,-	p@chr14:106332598..106332607, -
3.61e-34	FFCP PHASE1:Hg19::chr1:170042665..170042670,+	p@chr1:170042665..170042670, +
3.61e-34	FFCP PHASE2:Hg19::chr14:106332598..106332607,-	p@chr14:106332598..106332607, -
3.61e-34	FFCP PHASE2:Hg19::chr1:170042665..170042670,+	p@chr1:170042665..170042670, +
5.05e-34	FFCP PHASE1:Hg19::chr3:22414302..22414311,-	p14@ZNF385D
5.05e-34	FFCP PHASE1:Hg19::chr6:110797642..110797655,-	p5@SLC22A16
5.05e-34	FFCP PHASE2:Hg19::chr3:22414302..22414311,-	p14@ZNF385D
5.05e-34	FFCP PHASE2:Hg19::chr6:110797642..110797655,-	p5@SLC22A16
7.06e-34	FFCP PHASE2:Hg19::chr3:128721079..128721099,-	p@chr3:128721079..128721099, -
7.06e-34	FFCP PHASE1:Hg19::chr6:156941231..156941245,-	p@chr6:156941231..156941245, -
7.06e-34	FFCP PHASE1:Hg19::chr14:106365436..106365443,+	p@chr14:106365436..106365443, +
7.06e-34	FFCP PHASE1:Hg19::chr11:67415073..67415078,-	p6@ACY3
7.06e-34	FFCP PHASE2:Hg19::chr6:156941231..156941245,-	p@chr6:156941231..156941245, -
7.06e-34	FFCP PHASE2:Hg19::chr11:67415073..67415078,-	p6@ACY3
7.06e-34	FFCP PHASE1:Hg19::chrX:30607165..30607171,+	p@chrX:30607165..30607171, +
7.06e-34	FFCP PHASE1:Hg19::chr17:56348026..56348034,-	p@chr17:56348026..56348034, -
7.06e-34	FFCP PHASE1:Hg19::chr17:56357337..56357342,-	p@chr17:56357337..56357342, -
7.06e-34	FFCP PHASE1:Hg19::chr17:56357123..56357132,-	p@chr17:56357123..56357132, -
7.06e-34	FFCP PHASE2:Hg19::chr14:106365436..106365443,+	p@chr14:106365436..106365443, +
7.06e-34	FFCP PHASE2:Hg19::chrX:30607165..30607171,+	p@chrX:30607165..30607171, +
7.06e-34	FFCP PHASE2:Hg19::chr17:56348026..56348034,-	p@chr17:56348026..56348034, -
7.06e-34	FFCP PHASE2:Hg19::chr17:56357337..56357342,-	p@chr17:56357337..56357342, -
7.06e-34	FFCP PHASE1:Hg19::chr3:128721079..128721099,-	p@chr3:128721079..128721099, -
7.06e-34	FFCP PHASE2:Hg19::chr17:56357123..56357132,-	p@chr17:56357123..56357132, -
9.85e-34	FFCP PHASE2:Hg19::chr6:74406940..74406983,+	p@chr6:74406940..74406983, +
9.85e-34	FFCP PHASE1:Hg19::chr17:56353028..56353052,-	p@chr17:56353028..56353052, -
9.85e-34	FFCP PHASE1:Hg19::chr3:21868304..21868313,-	p@chr3:21868304..21868313, -
9.85e-34	FFCP PHASE2:Hg19::chr17:56353028..56353052,-	p@chr17:56353028..56353052, -

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