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CL:0002138

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Name:endothelial cell of lymphatic vessel
Namespace:FANTOM
Definition:"A endothelial cell of a lymphatic vessel. The border of the oak leaf-shaped endothelial cell of initial lymphatics are joined by specialized buttons. The discontinuous feature of buttons distinguishes them from zippers in collecting lymphatics, but both types of junctions are composed of proteins typical of adherens junctions and tight junctions found in the endothelium of blood vessels. Buttons seal the sides of flaps of the oak leaf-shaped endothelial cell, leaving open the tips of flaps as routes for fluid entry without disassembly and reformation of intercellular junctions." [GOC:tfm, PMID:17846148]
Xrefs:
links:

BTO:0004167

FMA:68458
Synonyms: "lymphatic endothelial cell" EXACT []
Alt_id: CL:1000421
Created by:tmeehan
Creation date:2010-08-24T02:05:28Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0002139(endothelial cell of vascular tree)
develops_from:CL:0005022(vascular lymphangioblast)
part_of:UBERON:0001473(lymphatic vessel)



Children


derives from:FF:0000049 (human lymphatic endothelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
  • 11317-117D3 (Endothelial Cells - Lymphatic, donor2)
  • 11393-118C7 (Endothelial Cells - Lymphatic, donor3)
  • 12260-130A1 (Lymphatic Endothelial cells response to VEGFC)
  • 12261-130A2 (Lymphatic Endothelial cells response to VEGFC)
  • 12262-130A3 (Lymphatic Endothelial cells response to VEGFC)
  • 12263-130A4 (Lymphatic Endothelial cells response to VEGFC)
  • 12264-130A5 (Lymphatic Endothelial cells response to VEGFC)
  • 12265-130A6 (Lymphatic Endothelial cells response to VEGFC)
  • 12266-130A7 (Lymphatic Endothelial cells response to VEGFC)

... further results Mouse (Mus musculus)

  • 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
  • 11317-117D3 (Endothelial Cells - Lymphatic, donor2)
  • 11393-118C7 (Endothelial Cells - Lymphatic, donor3)
  • 12260-130A1 (Lymphatic Endothelial cells response to VEGFC)
  • 12261-130A2 (Lymphatic Endothelial cells response to VEGFC)
  • 12262-130A3 (Lymphatic Endothelial cells response to VEGFC)
  • 12263-130A4 (Lymphatic Endothelial cells response to VEGFC)
  • 12264-130A5 (Lymphatic Endothelial cells response to VEGFC)
  • 12265-130A6 (Lymphatic Endothelial cells response to VEGFC)
  • 12266-130A7 (Lymphatic Endothelial cells response to VEGFC)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002138 (endothelial cell of lymphatic vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data