CL:0002255

Name:	stromal cell of endometrium
Namespace:	FANTOM
Definition:	"An epithelial cell that regulates growth and differentiation of the overlying epithelium." [GOC:tfm, PMID:11331626]
Xrefs:	Expandlinks: FMA:86490
Created by:	tmeehan
Creation date:	2010-09-08T09:50:04Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000499(stromal cell),CL:0002149(epithelial cell of uterus)
part_of:	UBERON:0001295(endometrium)

Children

derives from:	FF:0101555 (endometrial cancer cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
• 10497-107C2 (endometrial carcinoma cell line:OMC-2)
• 10623-108H2
• 10639-108I9 (serous adenocarcinoma cell line:JHOS-2)
• 10641-109A2
• 10643-109A4 (endometrioid adenocarcinoma cell line:JHUEM-1)
• 10644-109A5
• 10645-109A6
• 10649-109B1
• 10650-109B2

... further results Mouse (Mus musculus)

• 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
• 10497-107C2 (endometrial carcinoma cell line:OMC-2)
• 10623-108H2
• 10639-108I9 (serous adenocarcinoma cell line:JHOS-2)
• 10641-109A2
• 10643-109A4 (endometrioid adenocarcinoma cell line:JHUEM-1)
• 10644-109A5
• 10645-109A6
• 10649-109B1
• 10650-109B2

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002255 (stromal cell of endometrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
2.83e-66	FFCP PHASE1:Hg19::chr3:168726935..168726936,-	p@chr3:168726935..168726936, -
2.83e-66	FFCP PHASE2:Hg19::chr3:168726935..168726936,-	p@chr3:168726935..168726936, -
2.83e-66	FFCP PHASE1:Hg19::chr9:88496176..88496181,+	p@chr9:88496176..88496181, +
2.83e-66	FFCP PHASE2:Hg19::chr9:88496176..88496181,+	p@chr9:88496176..88496181, +
2.83e-66	FFCP PHASE1:Hg19::chr20:30943898..30943899,-	p@chr20:30943898..30943899, -
2.83e-66	FFCP PHASE2:Hg19::chr20:30943898..30943899,-	p@chr20:30943898..30943899, -
2.83e-66	FFCP PHASE1:Hg19::chr2:22353663..22353666,+	p@chr2:22353663..22353666, +
2.83e-66	FFCP PHASE2:Hg19::chr2:22353663..22353666,+	p@chr2:22353663..22353666, +
3.67e-66	FFCP PHASE1:Hg19::chr7:150006580..150006590,+	p6@LRRC61
3.67e-66	FFCP PHASE2:Hg19::chr7:150006580..150006590,+	p6@LRRC61
1.82e-59	FFCP PHASE2:Hg19::chr11:13984141..13984144,+	p6@SPON1
1.82e-59	FFCP PHASE1:Hg19::chr11:13984141..13984144,+	p6@SPON1
4.05e-53	FFCP PHASE2:Hg19::chr2:113982581..113982590,-	p@chr2:113982581..113982590, -
4.05e-53	FFCP PHASE1:Hg19::chr2:113982581..113982590,-	p@chr2:113982581..113982590, -
1.05e-49	FFCP PHASE1:Hg19::chr6:75178505..75178516,+	p@chr6:75178505..75178516, +
1.05e-49	FFCP PHASE2:Hg19::chr6:75178505..75178516,+	p@chr6:75178505..75178516, +
9.76e-45	FFCP PHASE1:Hg19::chr6:42724431..42724435,+	p@chr6:42724431..42724435, +
9.76e-45	FFCP PHASE2:Hg19::chr6:42724431..42724435,+	p@chr6:42724431..42724435, +
9.76e-45	FFCP PHASE2:Hg19::chr11:13974012..13974015,-	p@chr11:13974012..13974015, -
9.76e-45	FFCP PHASE1:Hg19::chr11:13974012..13974015,-	p@chr11:13974012..13974015, -
1.22e-44	FFCP PHASE1:Hg19::chr17:37809300..37809309,+	p13@STARD3
1.22e-44	FFCP PHASE1:Hg19::chr8:101588316..101588317,-	p1@AK127517
1.22e-44	FFCP PHASE2:Hg19::chr8:101588316..101588317,-	p1@AK127517
1.22e-44	FFCP PHASE2:Hg19::chr17:37809300..37809309,+	p13@STARD3
6.48e-43	FFCP PHASE1:Hg19::chr11:16916978..16916996,-	p@chr11:16916978..16916996, -
6.48e-43	FFCP PHASE2:Hg19::chr11:16916978..16916996,-	p@chr11:16916978..16916996, -
9.19e-38	FFCP PHASE1:Hg19::chr4:19711103..19711108,+	p@chr4:19711103..19711108, +
9.19e-38	FFCP PHASE2:Hg19::chr4:19711103..19711108,+	p@chr4:19711103..19711108, +
1.72e-37	FFCP PHASE2:Hg19::chr5:8984611..8984621,-	p@chr5:8984611..8984621, -
1.72e-37	FFCP PHASE1:Hg19::chr5:8984611..8984621,-	p@chr5:8984611..8984621, -
1.42e-36	FFCP PHASE2:Hg19::chr2:113982635..113982648,-	p8@PAX8
1.42e-36	FFCP PHASE1:Hg19::chr2:113982635..113982648,-	p8@PAX8
6.14e-36	FFCP PHASE1:Hg19::chr13:23458336..23458347,+	p@chr13:23458336..23458347, +
6.14e-36	FFCP PHASE2:Hg19::chr13:23458336..23458347,+	p@chr13:23458336..23458347, +
4.27e-34	FFCP PHASE2:Hg19::chr1:197927638..197927639,-	p@chr1:197927638..197927639, -
4.27e-34	FFCP PHASE1:Hg19::chr4:95680548..95680553,-	p@chr4:95680548..95680553, -
4.27e-34	FFCP PHASE2:Hg19::chr11:61897578..61897585,+	p10@INCENP
4.27e-34	FFCP PHASE2:Hg19::chr4:95680548..95680553,-	p@chr4:95680548..95680553, -
4.27e-34	FFCP PHASE1:Hg19::chr14:84320708..84320731,+	p@chr14:84320708..84320731, +
4.27e-34	FFCP PHASE1:Hg19::chr8:120220206..120220214,+	p23@MAL2
4.27e-34	FFCP PHASE2:Hg19::chr8:120220206..120220214,+	p23@MAL2
4.27e-34	FFCP PHASE1:Hg19::chr12:79349337..79349347,-	p@chr12:79349337..79349347, -
4.27e-34	FFCP PHASE1:Hg19::chr4:162584094..162584130,-	p@chr4:162584094..162584130, -
4.27e-34	FFCP PHASE1:Hg19::chr14:33147559..33147570,+	p@chr14:33147559..33147570, +
4.27e-34	FFCP PHASE1:Hg19::chr13:85397447..85397450,-	p@chr13:85397447..85397450, -
4.27e-34	FFCP PHASE2:Hg19::chr4:162584094..162584130,-	p@chr4:162584094..162584130, -
4.27e-34	FFCP PHASE1:Hg19::chr1:81428697..81428704,-	p@chr1:81428697..81428704, -
4.27e-34	FFCP PHASE1:Hg19::chr11:61897578..61897585,+	p10@INCENP
4.27e-34	FFCP PHASE1:Hg19::chr4:95680517..95680526,-	p@chr4:95680517..95680526, -
4.27e-34	FFCP PHASE2:Hg19::chr1:81428697..81428704,-	p@chr1:81428697..81428704, -
4.27e-34	FFCP PHASE2:Hg19::chr14:84320708..84320731,+	p@chr14:84320708..84320731, +
4.27e-34	FFCP PHASE2:Hg19::chr4:95680517..95680526,-	p@chr4:95680517..95680526, -
4.27e-34	FFCP PHASE1:Hg19::chr7:6312923..6312932,-	p@chr7:6312923..6312932, -
4.27e-34	FFCP PHASE2:Hg19::chr7:6312923..6312932,-	p@chr7:6312923..6312932, -
4.27e-34	FFCP PHASE1:Hg19::chr7:119683648..119683658,+	p@chr7:119683648..119683658, +
4.27e-34	FFCP PHASE2:Hg19::chr12:79349337..79349347,-	p@chr12:79349337..79349347, -
4.27e-34	FFCP PHASE2:Hg19::chr7:119683648..119683658,+	p@chr7:119683648..119683658, +
4.27e-34	FFCP PHASE1:Hg19::chr6:31097301..31097322,+	p@chr6:31097301..31097322, +
4.27e-34	FFCP PHASE1:Hg19::chr19:28782435..28782439,+	p@chr19:28782435..28782439, +
4.27e-34	FFCP PHASE2:Hg19::chr14:33147559..33147570,+	p@chr14:33147559..33147570, +
4.27e-34	FFCP PHASE2:Hg19::chr13:85397447..85397450,-	p@chr13:85397447..85397450, -
4.27e-34	FFCP PHASE2:Hg19::chr6:31097301..31097322,+	p@chr6:31097301..31097322, +
4.27e-34	FFCP PHASE2:Hg19::chr19:28782435..28782439,+	p@chr19:28782435..28782439, +
4.27e-34	FFCP PHASE1:Hg19::chr1:197927638..197927639,-	p@chr1:197927638..197927639, -
5.98e-34	FFCP PHASE1:Hg19::chr1:159836049..159836056,+	p@chr1:159836049..159836056, +
5.98e-34	FFCP PHASE2:Hg19::chr1:159836049..159836056,+	p@chr1:159836049..159836056, +
5.98e-34	FFCP PHASE1:Hg19::chr7:154497207..154497243,-	p@chr7:154497207..154497243, -
5.98e-34	FFCP PHASE2:Hg19::chr7:154497207..154497243,-	p@chr7:154497207..154497243, -
8.35e-34	FFCP PHASE1:Hg19::chr2:220080970..220081009,-	p16@ABCB6
8.35e-34	FFCP PHASE2:Hg19::chr2:220080970..220081009,-	p16@ABCB6
8.35e-34	FFCP PHASE1:Hg19::chr4:19457174..19457178,+	p3@ENST00000511431
8.35e-34	FFCP PHASE2:Hg19::chr4:19457174..19457178,+	p3@ENST00000511431
9.39e-34	FFCP PHASE1:Hg19::chr22:28901919..28901924,+	p@chr22:28901919..28901924, +
9.39e-34	FFCP PHASE2:Hg19::chr22:28901919..28901924,+	p@chr22:28901919..28901924, +
9.87e-34	FFCP PHASE1:Hg19::chr6:161736275..161736279,-	p@chr6:161736275..161736279, -
9.87e-34	FFCP PHASE2:Hg19::chr6:161736275..161736279,-	p@chr6:161736275..161736279, -
9.26e-30	FFCP PHASE1:Hg19::chr2:113990903..113990907,-	p@chr2:113990903..113990907, -
9.26e-30	FFCP PHASE2:Hg19::chr2:113990903..113990907,-	p@chr2:113990903..113990907, -
7.1e-28	FFCP PHASE1:Hg19::chr2:113981834..113981850,-	p@chr2:113981834..113981850, -
7.1e-28	FFCP PHASE2:Hg19::chr2:113981834..113981850,-	p@chr2:113981834..113981850, -
7.39e-28	FFCP PHASE1:Hg19::chr1:206288186..206288203,-	p1@C1orf186
7.39e-28	FFCP PHASE2:Hg19::chr1:206288186..206288203,-	p1@C1orf186
2.32e-27	FFCP PHASE1:Hg19::chr2:113979656..113979676,-	p@chr2:113979656..113979676, -
2.32e-27	FFCP PHASE2:Hg19::chr2:113979656..113979676,-	p@chr2:113979656..113979676, -
2.38e-27	FFCP PHASE1:Hg19::chr12:113644361..113644365,+	p@chr12:113644361..113644365, +
2.38e-27	FFCP PHASE2:Hg19::chr11:12061317..12061323,-	p@chr11:12061317..12061323, -
2.38e-27	FFCP PHASE1:Hg19::chr11:74751521..74751532,+	p@chr11:74751521..74751532, +
2.38e-27	FFCP PHASE2:Hg19::chr12:113644361..113644365,+	p@chr12:113644361..113644365, +
2.38e-27	FFCP PHASE1:Hg19::chr11:12061317..12061323,-	p@chr11:12061317..12061323, -
2.38e-27	FFCP PHASE2:Hg19::chr11:74751521..74751532,+	p@chr11:74751521..74751532, +
2.72e-27	FFCP PHASE1:Hg19::chr4:69929665..69929672,+	p@chr4:69929665..69929672, +
2.72e-27	FFCP PHASE2:Hg19::chr4:69929665..69929672,+	p@chr4:69929665..69929672, +
3.11e-27	FFCP PHASE1:Hg19::chr15:75045404..75045444,+	p@chr15:75045404..75045444, +
3.11e-27	FFCP PHASE2:Hg19::chr16:34981355..34981367,+	p2@ENST00000516373
3.11e-27	FFCP PHASE1:Hg19::chr13:37363331..37363344,-	p@chr13:37363331..37363344, -
3.11e-27	FFCP PHASE2:Hg19::chr15:75045404..75045444,+	p@chr15:75045404..75045444, +
3.11e-27	FFCP PHASE1:Hg19::chr16:34981355..34981367,+	p2@ENST00000516373
3.11e-27	FFCP PHASE2:Hg19::chr13:37363331..37363344,-	p@chr13:37363331..37363344, -
2.36e-24	FFCP PHASE1:Hg19::chr1:153599635..153599646,-	p17@S100A13
2.36e-24	FFCP PHASE2:Hg19::chr1:153599635..153599646,-	p17@S100A13

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