CL:0002328

Name:	bronchial epithelial cell
Namespace:	FANTOM
Definition:	"An epithelial cell of the bronchus." [GOC:tfm]
Xrefs:	Expandlinks: BTO:0002922
Created by:	tmeehan
Creation date:	2010-09-20T02:00:00Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0002202(epithelial cell of tracheobronchial tree)
part_of:	UBERON:0002185(bronchus),UBERON:0002031(epithelium of bronchus),UBERON:0002185(bronchus)

Children

derives from:	FF:0000015 (human bronchial epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11453-119A4 (Bronchial Epithelial Cell, donor4)
• 11457-119A8 (Bronchial Epithelial Cell, donor5)
• 11461-119B3 (Bronchial Epithelial Cell, donor6)
• 11511-119G8 (Bronchial Epithelial Cell, donor1)
• 11591-120G7 (Bronchial Epithelial Cell, donor2)
• 11672-122G7 (Bronchial Epithelial Cell, donor3)
• 11769-123I5 (Bronchial Epithelial Cell, donor7)

Mouse (Mus musculus)

• 11453-119A4 (Bronchial Epithelial Cell, donor4)
• 11457-119A8 (Bronchial Epithelial Cell, donor5)
• 11461-119B3 (Bronchial Epithelial Cell, donor6)
• 11511-119G8 (Bronchial Epithelial Cell, donor1)
• 11591-120G7 (Bronchial Epithelial Cell, donor2)
• 11672-122G7 (Bronchial Epithelial Cell, donor3)
• 11769-123I5 (Bronchial Epithelial Cell, donor7)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002328 (bronchial epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
1.71e-84	FFCP PHASE1:Hg19::chr3:189632708..189632721,-	p@chr3:189632708..189632721, -
1.71e-84	FFCP PHASE2:Hg19::chr3:189632708..189632721,-	p@chr3:189632708..189632721, -
2.4e-66	FFCP PHASE1:Hg19::chr1:209823455..209823467,-	p@chr1:209823455..209823467, -
2.4e-66	FFCP PHASE2:Hg19::chr1:209823455..209823467,-	p@chr1:209823455..209823467, -
3.13e-50	FFCP PHASE1:Hg19::chr1:95088552..95088567,+	p@chr1:95088552..95088567, +
3.13e-50	FFCP PHASE2:Hg19::chr1:95088552..95088567,+	p@chr1:95088552..95088567, +
1.03e-46	FFCP PHASE1:Hg19::chr1:3591362..3591369,-	p@chr1:3591362..3591369, -
1.03e-46	FFCP PHASE2:Hg19::chr1:3591362..3591369,-	p@chr1:3591362..3591369, -
5.0e-45	FFCP PHASE1:Hg19::chr2:113830230..113830233,-	p@chr2:113830230..113830233, -
5.0e-45	FFCP PHASE2:Hg19::chr2:113830230..113830233,-	p@chr2:113830230..113830233, -
1.92e-43	FFCP PHASE2:Hg19::chr10:73679250..73679255,-	p@chr10:73679250..73679255, -
1.92e-43	FFCP PHASE1:Hg19::chr10:73679250..73679255,-	p@chr10:73679250..73679255, -
7.6e-41	FFCP PHASE2:Hg19::chr1:9953308..9953320,-	p9@CTNNBIP1
7.6e-41	FFCP PHASE1:Hg19::chr1:9953308..9953320,-	p9@CTNNBIP1
1.49e-38	FFCP PHASE1:Hg19::chr17:48611912..48611919,+	p7@EPN3
1.49e-38	FFCP PHASE2:Hg19::chr17:48611912..48611919,+	p7@EPN3
1.62e-38	FFCP PHASE1:Hg19::chr1:95089255..95089279,-	p1@ENST00000435559
1.62e-38	FFCP PHASE2:Hg19::chr1:95089255..95089279,-	p1@ENST00000435559
1.8e-38	FFCP PHASE1:Hg19::chr7:135018332..135018336,+	p@chr7:135018332..135018336, +
1.8e-38	FFCP PHASE2:Hg19::chr7:135018332..135018336,+	p@chr7:135018332..135018336, +
3.06e-38	FFCP PHASE2:Hg19::chr17:48611940..48611947,+	p5@EPN3
3.06e-38	FFCP PHASE1:Hg19::chr17:48611940..48611947,+	p5@EPN3
5.76e-38	FFCP PHASE2:Hg19::chr2:74211227..74211238,+	p@chr2:74211227..74211238, +
5.76e-38	FFCP PHASE1:Hg19::chr2:74211227..74211238,+	p@chr2:74211227..74211238, +
2.35e-36	FFCP PHASE1:Hg19::chr17:38179639..38179652,-	p7@MED24
2.35e-36	FFCP PHASE2:Hg19::chr17:38179639..38179652,-	p7@MED24
2.53e-35	FFCP PHASE2:Hg19::chr20:14248741..14248745,-	p@chr20:14248741..14248745, -
2.53e-35	FFCP PHASE1:Hg19::chr20:14248741..14248745,-	p@chr20:14248741..14248745, -
1.96e-34	FFCP PHASE2:Hg19::chr17:38652393..38652403,-	p16@TNS4
1.96e-34	FFCP PHASE1:Hg19::chr17:38652393..38652403,-	p16@TNS4
2.75e-34	FFCP PHASE2:Hg19::chr1:153540420..153540455,+	p@chr1:153540420..153540455, +
2.75e-34	FFCP PHASE1:Hg19::chr1:153540420..153540455,+	p@chr1:153540420..153540455, +
3.07e-34	FFCP PHASE2:Hg19::chr12:52844247..52844256,-	p@chr12:52844247..52844256, -
3.07e-34	FFCP PHASE1:Hg19::chr12:52844247..52844256,-	p@chr12:52844247..52844256, -
5.51e-34	FFCP PHASE2:Hg19::chr11:94427497..94427507,-	p@chr11:94427497..94427507, -
5.51e-34	FFCP PHASE1:Hg19::chr11:94427497..94427507,-	p@chr11:94427497..94427507, -
5.96e-34	FFCP PHASE1:Hg19::chr1:27181551..27181558,-	p@chr1:27181551..27181558, -
5.96e-34	FFCP PHASE2:Hg19::chr1:27181551..27181558,-	p@chr1:27181551..27181558, -
6.76e-34	FFCP PHASE2:Hg19::chr1:183133608..183133625,-	p@chr1:183133608..183133625, -
6.76e-34	FFCP PHASE1:Hg19::chr1:183133608..183133625,-	p@chr1:183133608..183133625, -
1.27e-33	FFCP PHASE2:Hg19::chr3:190252374..190252383,-	p@chr3:190252374..190252383, -
1.27e-33	FFCP PHASE1:Hg19::chr3:190252374..190252383,-	p@chr3:190252374..190252383, -
1.5e-33	FFCP PHASE2:Hg19::chr8:29414184..29414190,+	p@chr8:29414184..29414190, +
1.5e-33	FFCP PHASE1:Hg19::chr8:29414184..29414190,+	p@chr8:29414184..29414190, +
6.66e-33	FFCP PHASE2:Hg19::chr14:67879076..67879080,+	p@chr14:67879076..67879080, +
6.66e-33	FFCP PHASE1:Hg19::chr14:67879076..67879080,+	p@chr14:67879076..67879080, +
1.14e-32	FFCP PHASE1:Hg19::chr1:209807970..209807983,-	p@chr1:209807970..209807983, -
1.14e-32	FFCP PHASE2:Hg19::chr1:209807970..209807983,-	p@chr1:209807970..209807983, -
2.68e-32	FFCP PHASE1:Hg19::chr6:83075367..83075383,-	p@chr6:83075367..83075383, -
2.68e-32	FFCP PHASE2:Hg19::chr6:83075367..83075383,-	p@chr6:83075367..83075383, -
2.95e-31	FFCP PHASE2:Hg19::chr4:15937715..15937733,-	p@chr4:15937715..15937733, -
2.95e-31	FFCP PHASE1:Hg19::chr4:15937715..15937733,-	p@chr4:15937715..15937733, -
6.66e-31	FFCP PHASE2:Hg19::chr9:26747081..26747110,+	p@chr9:26747081..26747110, +
6.66e-31	FFCP PHASE1:Hg19::chr9:26747081..26747110,+	p@chr9:26747081..26747110, +
1.0e-30	FFCP PHASE2:Hg19::chr11:120008883..120008884,-	p16@TRIM29
1.0e-30	FFCP PHASE1:Hg19::chr11:120008883..120008884,-	p16@TRIM29
1.09e-30	FFCP PHASE1:Hg19::chr13:61507880..61507904,-	p@chr13:61507880..61507904, -
1.09e-30	FFCP PHASE2:Hg19::chr13:61507880..61507904,-	p@chr13:61507880..61507904, -
1.47e-30	FFCP PHASE1:Hg19::chr1:152475755..152475761,+	p@chr1:152475755..152475761, +
1.47e-30	FFCP PHASE2:Hg19::chr1:152475755..152475761,+	p@chr1:152475755..152475761, +
1.66e-30	FFCP PHASE2:Hg19::chr17:39777017..39777027,+	p@chr17:39777017..39777027, +
1.66e-30	FFCP PHASE1:Hg19::chr17:39777017..39777027,+	p@chr17:39777017..39777027, +
1.71e-30	FFCP PHASE1:Hg19::chr4:82554167..82554171,+	p@chr4:82554167..82554171, +
1.71e-30	FFCP PHASE2:Hg19::chr4:82554167..82554171,+	p@chr4:82554167..82554171, +
2.24e-30	FFCP PHASE1:Hg19::chr1:209825932..209825936,-	p10@LAMB3
2.24e-30	FFCP PHASE2:Hg19::chr1:209825932..209825936,-	p10@LAMB3
3.1e-30	FFCP PHASE2:Hg19::chr15:76443020..76443024,-	p@chr15:76443020..76443024, -
3.1e-30	FFCP PHASE1:Hg19::chr15:76443020..76443024,-	p@chr15:76443020..76443024, -
3.11e-30	FFCP PHASE1:Hg19::chr17:39780624..39780631,-	p8@KRT17
3.11e-30	FFCP PHASE2:Hg19::chr17:39780624..39780631,-	p8@KRT17
5.61e-30	FFCP PHASE2:Hg19::chr1:156720278..156720286,+	p15@PRCC
5.61e-30	FFCP PHASE1:Hg19::chr1:156720278..156720286,+	p15@PRCC
8.74e-30	FFCP PHASE1:Hg19::chr14:94426721..94426726,+	p@chr14:94426721..94426726, +
8.74e-30	FFCP PHASE2:Hg19::chr14:94426721..94426726,+	p@chr14:94426721..94426726, +
1.34e-29	FFCP PHASE1:Hg19::chr12:52913881..52913889,+	p@chr12:52913881..52913889, +
1.34e-29	FFCP PHASE2:Hg19::chr12:52913881..52913889,+	p@chr12:52913881..52913889, +
1.63e-29	FFCP PHASE1:Hg19::chr17:73719483..73719489,-	p@chr17:73719483..73719489, -
1.63e-29	FFCP PHASE2:Hg19::chr17:73719483..73719489,-	p@chr17:73719483..73719489, -
1.98e-29	FFCP PHASE1:Hg19::chr1:209827520..209827532,-	p@chr1:209827520..209827532, -
1.98e-29	FFCP PHASE2:Hg19::chr1:209827520..209827532,-	p@chr1:209827520..209827532, -
2.64e-29	FFCP PHASE1:Hg19::chr12:56332022..56332030,+	p17@DGKA
2.64e-29	FFCP PHASE2:Hg19::chr12:56332022..56332030,+	p17@DGKA
3.27e-28	FFCP PHASE1:Hg19::chr17:38657781..38657786,-	p15@TNS4
3.27e-28	FFCP PHASE2:Hg19::chr17:38657781..38657786,-	p15@TNS4
4.32e-28	FFCP PHASE1:Hg19::chr1:55436540..55436544,-	p@chr1:55436540..55436544, -
4.32e-28	FFCP PHASE2:Hg19::chr1:55436540..55436544,-	p@chr1:55436540..55436544, -
6.24e-28	FFCP PHASE1:Hg19::chr1:153534013..153534025,+	p@chr1:153534013..153534025, +
6.24e-28	FFCP PHASE2:Hg19::chr1:153534013..153534025,+	p@chr1:153534013..153534025, +
8.22e-28	FFCP PHASE2:Hg19::chr17:39768786..39768828,-	p2@KRT16
8.22e-28	FFCP PHASE1:Hg19::chr17:39768786..39768828,-	p2@KRT16
1.22e-27	FFCP PHASE1:Hg19::chr1:44446555..44446566,+	p16@B4GALT2
1.22e-27	FFCP PHASE1:Hg19::chr19:48101913..48101916,-	p@chr19:48101913..48101916, -
1.22e-27	FFCP PHASE2:Hg19::chr1:153587360..153587377,-	p@chr1:153587360..153587377, -
1.22e-27	FFCP PHASE2:Hg19::chr1:44446555..44446566,+	p16@B4GALT2
1.22e-27	FFCP PHASE2:Hg19::chr19:48101913..48101916,-	p@chr19:48101913..48101916, -
1.22e-27	FFCP PHASE1:Hg19::chr2:70581573..70581577,-	p@chr2:70581573..70581577, -
1.22e-27	FFCP PHASE2:Hg19::chr2:70581573..70581577,-	p@chr2:70581573..70581577, -
1.22e-27	FFCP PHASE1:Hg19::chr1:153587360..153587377,-	p@chr1:153587360..153587377, -
1.39e-27	FFCP PHASE1:Hg19::chr2:20402306..20402318,-	p@chr2:20402306..20402318, -
1.39e-27	FFCP PHASE1:Hg19::chr1:46647115..46647118,-	p@chr1:46647115..46647118, -

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