CL:0002476
From FANTOM5_SSTAR
Name: | bone marrow macrophage | |
---|---|---|
Namespace: | FANTOM | |
Definition: | "A tissue-resident macrophage located in the bone marrow. This cell type is B220-negative, CD3e-negative, Ly-6C-negative, CD115-positive, F4/80-positive." [GOC:tfm, http://www.immgen.org/index_content.html] | |
Xrefs: |
| |
Synonyms: | "MF.BM" RELATED [] | |
Created by: | tmeehan | |
Creation date: | 2010-11-23T04:19:25Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000864(tissue-resident macrophage),CL:1001610(bone marrow hematopoietic cell) |
---|---|
part_of: | UBERON:0002371(bone marrow) |
Children
is a: | FF:3704-172A1 (macrophage, bone marrow derived),FF:3967-173D4 (macrophage, TB infection, non-stimulated BMDM, without Mtb) |
---|---|
derives from: | FF:0200021 (macrophage, bone marrow-derived sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 2171-50H8 (macrophage, bone marrow derived)
- 3560-170A1 (macrophage, bone marrow derived)
- 3632-171A1 (macrophage, bone marrow derived)
- 3704-172A1 (macrophage, bone marrow derived)
- 3967-173D4 (macrophage, TB infection, non-stimulated BMDM, without Mtb)
Mouse (Mus musculus)
- 2171-50H8 (macrophage, bone marrow derived)
- 3560-170A1 (macrophage, bone marrow derived)
- 3632-171A1 (macrophage, bone marrow derived)
- 3704-172A1 (macrophage, bone marrow derived)
- 3967-173D4 (macrophage, TB infection, non-stimulated BMDM, without Mtb)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002476 (bone marrow macrophage), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data