DOID:3112

Name:	papillary adenocarcinoma
Namespace:	FANTOM
Definition:	"An adenocarcinoma that derives_from epithelial cells originating in glandular tissue, which form complex papillary structures and exhibit compressive, destructive growth that replaces the normal tissue." [url:http://en.wikipedia.org/wiki/Papillary_adenocarcinoma]
Xrefs:	Expandlinks: MSH:D000231 NCI:C2853 SNOMEDCT_2010_1_31:189621008 SNOMEDCT_2010_1_31:4797003 SNOMEDCT_2010_1_31:64524002 UMLS_CUI:C0001420 UMLS_CUI:C1321863
Synonyms:	"Infiltrating and papillary adenocarcinoma" EXACT [SNOMEDCT_2005_07_31:64524002] "infiltrating papillary adenocarcinoma" EXACT [] "Papillary adenocarcinoma" EXACT [NCI2004_11_17:C2853] "Papillary adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:4797003] "Papillary adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189621008]
Alt_id:	DOID:5596

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	DOID:299(adenocarcinoma)

Children

is a:	FF:10437-106E5 (papillary adenocarcinoma cell line:8505C)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

• 10437-106E5 (papillary adenocarcinoma cell line:8505C)

Mouse (Mus musculus)

• 10437-106E5 (papillary adenocarcinoma cell line:8505C)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3112 (papillary adenocarcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
5.42e-195	FFCP PHASE2:Hg19::chr3:677239..677244,+	p@chr3:677239..677244, +
5.42e-195	FFCP PHASE2:Hg19::chr20:9013530..9013537,-	p@chr20:9013530..9013537, -
5.42e-195	FFCP PHASE2:Hg19::chr3:677267..677274,+	p@chr3:677267..677274, +
5.42e-195	FFCP PHASE1:Hg19::chr3:677239..677244,+	p@chr3:677239..677244, +
5.42e-195	FFCP PHASE1:Hg19::chr20:9013530..9013537,-	p@chr20:9013530..9013537, -
5.42e-195	FFCP PHASE1:Hg19::chr3:677267..677274,+	p@chr3:677267..677274, +
9.37e-99	FFCP PHASE2:Hg19::chr6:38754506..38754523,+	p@chr6:38754506..38754523, +
9.37e-99	FFCP PHASE2:Hg19::chr11:36376725..36376731,+	p@chr11:36376725..36376731, +
9.37e-99	FFCP PHASE2:Hg19::chr4:14094655..14094663,+	p@chr4:14094655..14094663, +
9.37e-99	FFCP PHASE1:Hg19::chr11:36376725..36376731,+	p@chr11:36376725..36376731, +
9.37e-99	FFCP PHASE1:Hg19::chr6:38754506..38754523,+	p@chr6:38754506..38754523, +
9.37e-99	FFCP PHASE1:Hg19::chr4:14094655..14094663,+	p@chr4:14094655..14094663, +
2.55e-98	FFCP PHASE2:Hg19::chr6:56765738..56765745,-	p@chr6:56765738..56765745, -
2.55e-98	FFCP PHASE1:Hg19::chr9:81496646..81496675,+	p@chr9:81496646..81496675, +
2.55e-98	FFCP PHASE2:Hg19::chr9:81496646..81496675,+	p@chr9:81496646..81496675, +
2.55e-98	FFCP PHASE1:Hg19::chr6:56765738..56765745,-	p@chr6:56765738..56765745, -
2.39e-66	FFCP PHASE2:Hg19::chr19:54545810..54545821,-	p@chr19:54545810..54545821, -
2.39e-66	FFCP PHASE1:Hg19::chr18:5540365..5540373,-	p22@EPB41L3
2.39e-66	FFCP PHASE1:Hg19::chr8:81124000..81124005,-	p@chr8:81124000..81124005, -
2.39e-66	FFCP PHASE1:Hg19::chr18:31950808..31950811,-	p@chr18:31950808..31950811, -
2.39e-66	FFCP PHASE2:Hg19::chr18:5540365..5540373,-	p22@EPB41L3
2.39e-66	FFCP PHASE2:Hg19::chr8:81124000..81124005,-	p@chr8:81124000..81124005, -
2.39e-66	FFCP PHASE2:Hg19::chr18:31950808..31950811,-	p@chr18:31950808..31950811, -
2.39e-66	FFCP PHASE1:Hg19::chr19:54545810..54545821,-	p@chr19:54545810..54545821, -
4.66e-66	FFCP PHASE2:Hg19::chr1:114654778..114654823,+	p@chr1:114654778..114654823, +
4.66e-66	FFCP PHASE1:Hg19::chr11:90393969..90393972,-	p@chr11:90393969..90393972, -
4.66e-66	FFCP PHASE1:Hg19::chr1:114654778..114654823,+	p@chr1:114654778..114654823, +
4.66e-66	FFCP PHASE2:Hg19::chr11:90393969..90393972,-	p@chr11:90393969..90393972, -
1.46e-50	FFCP PHASE2:Hg19::chr3:1113044..1113048,+	p@chr3:1113044..1113048, +
1.46e-50	FFCP PHASE1:Hg19::chrX:55684394..55684406,-	p@chrX:55684394..55684406, -
1.46e-50	FFCP PHASE2:Hg19::chrX:55684394..55684406,-	p@chrX:55684394..55684406, -
1.46e-50	FFCP PHASE1:Hg19::chr3:1113044..1113048,+	p@chr3:1113044..1113048, +
2.42e-50	FFCP PHASE2:Hg19::chr9:74838100..74838111,+	p@chr9:74838100..74838111, +
2.42e-50	FFCP PHASE1:Hg19::chr2:204266094..204266122,+	p@chr2:204266094..204266122, +
2.42e-50	FFCP PHASE1:Hg19::chr9:74838100..74838111,+	p@chr9:74838100..74838111, +
2.42e-50	FFCP PHASE2:Hg19::chr2:204266094..204266122,+	p@chr2:204266094..204266122, +
3.99e-50	FFCP PHASE1:Hg19::chr4:73248974..73249005,+	p@chr4:73248974..73249005, +
3.99e-50	FFCP PHASE2:Hg19::chr6:56765635..56765674,-	p@chr6:56765635..56765674, -
3.99e-50	FFCP PHASE1:Hg19::chr14:22659199..22659211,-	p@chr14:22659199..22659211, -
3.99e-50	FFCP PHASE1:Hg19::chr10:14431652..14431659,+	p@chr10:14431652..14431659, +
3.99e-50	FFCP PHASE2:Hg19::chr1:204159816..204159828,-	p@chr1:204159816..204159828, -
3.99e-50	FFCP PHASE2:Hg19::chr4:73248974..73249005,+	p@chr4:73248974..73249005, +
3.99e-50	FFCP PHASE1:Hg19::chr21:28899015..28899027,+	p@chr21:28899015..28899027, +
3.99e-50	FFCP PHASE1:Hg19::chr6:56765635..56765674,-	p@chr6:56765635..56765674, -
3.99e-50	FFCP PHASE2:Hg19::chr14:22659199..22659211,-	p@chr14:22659199..22659211, -
3.99e-50	FFCP PHASE2:Hg19::chr10:14431652..14431659,+	p@chr10:14431652..14431659, +
3.99e-50	FFCP PHASE2:Hg19::chr21:28899015..28899027,+	p@chr21:28899015..28899027, +
3.99e-50	FFCP PHASE1:Hg19::chr1:204159816..204159828,-	p@chr1:204159816..204159828, -
6.58e-50	FFCP PHASE2:Hg19::chr14:36642956..36642966,+	p@chr14:36642956..36642966, +
6.58e-50	FFCP PHASE1:Hg19::chr14:36642956..36642966,+	p@chr14:36642956..36642966, +
6.62e-41	FFCP PHASE2:Hg19::chr5:83381628..83381664,-	p@chr5:83381628..83381664, -
6.62e-41	FFCP PHASE1:Hg19::chr20:9269067..9269070,+	p@chr20:9269067..9269070, +
6.62e-41	FFCP PHASE1:Hg19::chrX:55684426..55684441,-	p@chrX:55684426..55684441, -
6.62e-41	FFCP PHASE2:Hg19::chr20:9269067..9269070,+	p@chr20:9269067..9269070, +
6.62e-41	FFCP PHASE2:Hg19::chrX:55684426..55684441,-	p@chrX:55684426..55684441, -
6.62e-41	FFCP PHASE1:Hg19::chr5:83381628..83381664,-	p@chr5:83381628..83381664, -
9.91e-41	FFCP PHASE1:Hg19::chr22:48134043..48134048,+	p@chr22:48134043..48134048, +
9.91e-41	FFCP PHASE2:Hg19::chr22:48134043..48134048,+	p@chr22:48134043..48134048, +
9.91e-41	FFCP PHASE1:Hg19::chr4:188508175..188508193,-	p@chr4:188508175..188508193, -
9.91e-41	FFCP PHASE2:Hg19::chr4:188508175..188508193,-	p@chr4:188508175..188508193, -
2.21e-40	FFCP PHASE2:Hg19::chr19:54545761..54545772,-	p@chr19:54545761..54545772, -
2.21e-40	FFCP PHASE2:Hg19::chr1:204159492..204159541,-	p@chr1:204159492..204159541, -
2.21e-40	FFCP PHASE1:Hg19::chr19:54545761..54545772,-	p@chr19:54545761..54545772, -
2.21e-40	FFCP PHASE1:Hg19::chr1:204159492..204159541,-	p@chr1:204159492..204159541, -
3.3e-40	FFCP PHASE2:Hg19::chr14:36990398..36990415,-	p10@NKX2-1
3.3e-40	FFCP PHASE2:Hg19::chr14:36643089..36643094,+	p@chr14:36643089..36643094, +
3.3e-40	FFCP PHASE1:Hg19::chr8:143317560..143317581,-	p@chr8:143317560..143317581, -
3.3e-40	FFCP PHASE1:Hg19::chr14:36990398..36990415,-	p10@NKX2-1
3.3e-40	FFCP PHASE1:Hg19::chr14:36643089..36643094,+	p@chr14:36643089..36643094, +
3.3e-40	FFCP PHASE2:Hg19::chr8:143317560..143317581,-	p@chr8:143317560..143317581, -
1.84e-34	FFCP PHASE2:Hg19::chr10:14431672..14431681,+	p@chr10:14431672..14431681, +
1.84e-34	FFCP PHASE2:Hg19::chr2:69180112..69180125,-	p3@GKN2
1.84e-34	FFCP PHASE1:Hg19::chr10:14431672..14431681,+	p@chr10:14431672..14431681, +
1.84e-34	FFCP PHASE1:Hg19::chr2:69180112..69180125,-	p3@GKN2
2.58e-34	FFCP PHASE1:Hg19::chr5:92498209..92498218,-	p@chr5:92498209..92498218, -
2.58e-34	FFCP PHASE2:Hg19::chr5:92498209..92498218,-	p@chr5:92498209..92498218, -
3.61e-34	FFCP PHASE1:Hg19::chr19:54545833..54545844,-	p@chr19:54545833..54545844, -
3.61e-34	FFCP PHASE2:Hg19::chr19:54545833..54545844,-	p@chr19:54545833..54545844, -
5.05e-34	FFCP PHASE1:Hg19::chr3:93707380..93707414,+	p@chr3:93707380..93707414, +
5.05e-34	FFCP PHASE2:Hg19::chr3:93707380..93707414,+	p@chr3:93707380..93707414, +
7.06e-34	FFCP PHASE2:Hg19::chr3:149079050..149079055,-	p@chr3:149079050..149079055, -
7.06e-34	FFCP PHASE2:Hg19::chr14:36989407..36989410,-	p15@NKX2-1
7.06e-34	FFCP PHASE1:Hg19::chr9:74810270..74810273,+	p@chr9:74810270..74810273, +
7.06e-34	FFCP PHASE1:Hg19::chr14:36989407..36989410,-	p15@NKX2-1
7.06e-34	FFCP PHASE1:Hg19::chr3:149079050..149079055,-	p@chr3:149079050..149079055, -
7.06e-34	FFCP PHASE2:Hg19::chr9:74810270..74810273,+	p@chr9:74810270..74810273, +
7.48e-30	FFCP PHASE2:Hg19::chr20:52789987..52790000,-	p4@CYP24A1
7.48e-30	FFCP PHASE1:Hg19::chr20:22806463..22806487,+	p@chr20:22806463..22806487, +
7.48e-30	FFCP PHASE1:Hg19::chr3:111633072..111633073,+	p@chr3:111633072..111633073, +
7.48e-30	FFCP PHASE1:Hg19::chr2:69180083..69180096,-	p4@GKN2
7.48e-30	FFCP PHASE2:Hg19::chr15:98646940..98646945,-	p1@ENST00000560195
7.48e-30	FFCP PHASE2:Hg19::chr14:85880761..85880773,+	p@chr14:85880761..85880773, +
7.48e-30	FFCP PHASE2:Hg19::chr20:22806463..22806487,+	p@chr20:22806463..22806487, +
7.48e-30	FFCP PHASE2:Hg19::chr3:111633072..111633073,+	p@chr3:111633072..111633073, +
7.48e-30	FFCP PHASE1:Hg19::chr15:98646940..98646945,-	p1@ENST00000560195
7.48e-30	FFCP PHASE2:Hg19::chr2:69180083..69180096,-	p4@GKN2
7.48e-30	FFCP PHASE1:Hg19::chr14:85880761..85880773,+	p@chr14:85880761..85880773, +
7.48e-30	FFCP PHASE1:Hg19::chr20:52789987..52790000,-	p4@CYP24A1
9.99e-30	FFCP PHASE2:Hg19::chrX:4463037..4463062,-	p@chrX:4463037..4463062, -
9.99e-30	FFCP PHASE2:Hg19::chr15:98546137..98546145,-	p@chr15:98546137..98546145, -

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