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DOID:5093

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Name:thoracic cancer
Namespace:FANTOM
Definition:"An organ system cancer located_in the thoracic cavity that develops in the different types of cells within the lungs, as well as less common cancers of the esophagus, the trachea, or the chest wall." [url:http://www.advocatehealth.com/cmc/body.cfm?id
Xrefs:
links:

MSH:D013899
NCI:C3406
SNOMEDCT_2010_1_31:188361007
SNOMEDCT_2010_1_31:188365003
SNOMEDCT_2010_1_31:255058005
UMLS_CUI:C0039981

UMLS_CUI:C0153661
Synonyms: "Thoracic tumor" EXACT [NCI2004_11_17:C3406]
"thorax cancer" EXACT []
"thorax neoplasm" EXACT [CSP2005:2005-5041]
"tumor of thorax (disorder)" EXACT [SNOMEDCT_2005_07_31:255058005]
Alt_id: DOID:3937

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0050686(organ system cancer)



Children


is a:DOID:1612 (breast cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5093 (thoracic cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.57e-195FFCP PHASE2:Hg19::chr17:74574500..74574512,-#_a853b8332f247b97ab1552d998ffa231p@chr17:74574500..74574512, -
2.57e-195FFCP PHASE1:Hg19::chr17:74574500..74574512,-#_a853b8332f247b97ab1552d998ffa231p@chr17:74574500..74574512, -
6.94e-147FFCP PHASE1:Hg19::chr9:83986187..83986191,-#_0c2d2c29324a9848a9c7a1967ace98efp@chr9:83986187..83986191, -
6.94e-147FFCP PHASE2:Hg19::chr10:19498541..19498551,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498541..19498551, +
6.94e-147FFCP PHASE2:Hg19::chr10:9012087..9012100,+#_0c2d2c29324a9848a9c7a1967ace98efp1@ENST00000456526
6.94e-147FFCP PHASE2:Hg19::chr21:41755024..41755027,+#_0c2d2c29324a9848a9c7a1967ace98efp2@DSCAM-AS1
6.94e-147FFCP PHASE1:Hg19::chr10:19498407..19498415,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498407..19498415, +
6.94e-147FFCP PHASE1:Hg19::chr11:85539944..85539950,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr11:85539944..85539950, +
6.94e-147FFCP PHASE1:Hg19::chr21:41756567..41756583,-#_0c2d2c29324a9848a9c7a1967ace98efp@chr21:41756567..41756583, -
6.94e-147FFCP PHASE2:Hg19::chr11:85539944..85539950,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr11:85539944..85539950, +
6.94e-147FFCP PHASE2:Hg19::chr10:19498568..19498573,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498568..19498573, +
6.94e-147FFCP PHASE1:Hg19::chr10:9012128..9012139,+#_0c2d2c29324a9848a9c7a1967ace98efp2@ENST00000456526
6.94e-147FFCP PHASE1:Hg19::chr12:3324464..3324485,+#_0c2d2c29324a9848a9c7a1967ace98efp4@TSPAN9
6.94e-147FFCP PHASE2:Hg19::chr21:41755185..41755210,+#_0c2d2c29324a9848a9c7a1967ace98efp1@DSCAM-AS1
6.94e-147FFCP PHASE2:Hg19::chr12:3324464..3324485,+#_0c2d2c29324a9848a9c7a1967ace98efp4@TSPAN9
6.94e-147FFCP PHASE2:Hg19::chr10:19498407..19498415,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498407..19498415, +
6.94e-147FFCP PHASE1:Hg19::chr10:8904309..8904317,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:8904309..8904317, +
6.94e-147FFCP PHASE2:Hg19::chr9:83986187..83986191,-#_0c2d2c29324a9848a9c7a1967ace98efp@chr9:83986187..83986191, -
6.94e-147FFCP PHASE1:Hg19::chr21:41711178..41711186,-#_0c2d2c29324a9848a9c7a1967ace98efp@chr21:41711178..41711186, -
6.94e-147FFCP PHASE1:Hg19::chr17:38843592..38843605,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr17:38843592..38843605, +
6.94e-147FFCP PHASE2:Hg19::chr10:9012128..9012139,+#_0c2d2c29324a9848a9c7a1967ace98efp2@ENST00000456526
6.94e-147FFCP PHASE2:Hg19::chr21:41756567..41756583,-#_0c2d2c29324a9848a9c7a1967ace98efp@chr21:41756567..41756583, -
6.94e-147FFCP PHASE1:Hg19::chr10:19498507..19498511,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498507..19498511, +
6.94e-147FFCP PHASE1:Hg19::chr10:8910201..8910211,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:8910201..8910211, +
6.94e-147FFCP PHASE2:Hg19::chr10:8904309..8904317,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:8904309..8904317, +
6.94e-147FFCP PHASE1:Hg19::chr21:41755024..41755027,+#_0c2d2c29324a9848a9c7a1967ace98efp2@DSCAM-AS1
6.94e-147FFCP PHASE2:Hg19::chr17:38843592..38843605,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr17:38843592..38843605, +
6.94e-147FFCP PHASE1:Hg19::chr10:19498541..19498551,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498541..19498551, +
6.94e-147FFCP PHASE2:Hg19::chr10:19498507..19498511,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498507..19498511, +
6.94e-147FFCP PHASE1:Hg19::chr10:9012087..9012100,+#_0c2d2c29324a9848a9c7a1967ace98efp1@ENST00000456526
6.94e-147FFCP PHASE2:Hg19::chr10:8910201..8910211,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:8910201..8910211, +
6.94e-147FFCP PHASE2:Hg19::chr21:41711178..41711186,-#_0c2d2c29324a9848a9c7a1967ace98efp@chr21:41711178..41711186, -
6.94e-147FFCP PHASE1:Hg19::chr21:41755185..41755210,+#_0c2d2c29324a9848a9c7a1967ace98efp1@DSCAM-AS1
6.94e-147FFCP PHASE1:Hg19::chr10:19498568..19498573,+#_0c2d2c29324a9848a9c7a1967ace98efp@chr10:19498568..19498573, +
2.79e-131FFCP PHASE2:Hg19::chr3:129226514..129226531,+#_be22c2acd301ffcf8179c112ee23acd0p@chr3:129226514..129226531, +
2.79e-131FFCP PHASE1:Hg19::chr3:129226514..129226531,+#_be22c2acd301ffcf8179c112ee23acd0p@chr3:129226514..129226531, +
8.91e-111FFCP PHASE1:Hg19::chr13:23733194..23733206,+#_3c45b9d4ff2197f6d3c0551fc42aabe4p@chr13:23733194..23733206, +
8.91e-111FFCP PHASE2:Hg19::chr20:52482691..52482707,-#_3c45b9d4ff2197f6d3c0551fc42aabe4p@chr20:52482691..52482707, -
8.91e-111FFCP PHASE2:Hg19::chr17:59469536..59469541,+#_3c45b9d4ff2197f6d3c0551fc42aabe4p@chr17:59469536..59469541, +
8.91e-111FFCP PHASE1:Hg19::chr20:52482691..52482707,-#_3c45b9d4ff2197f6d3c0551fc42aabe4p@chr20:52482691..52482707, -
8.91e-111FFCP PHASE2:Hg19::chr13:23733194..23733206,+#_3c45b9d4ff2197f6d3c0551fc42aabe4p@chr13:23733194..23733206, +
8.91e-111FFCP PHASE1:Hg19::chr17:59469536..59469541,+#_3c45b9d4ff2197f6d3c0551fc42aabe4p@chr17:59469536..59469541, +
1.3e-110FFCP PHASE2:Hg19::chr5:177505250..177505293,-#_9937851b82412d06e11f84a9637f4db4p@chr5:177505250..177505293, -
1.3e-110FFCP PHASE1:Hg19::chr5:177505250..177505293,-#_9937851b82412d06e11f84a9637f4db4p@chr5:177505250..177505293, -
3.03e-99FFCP PHASE2:Hg19::chr3:129226494..129226510,+#_cd591c67a774946fce8040e1fcc19d37p@chr3:129226494..129226510, +
3.03e-99FFCP PHASE1:Hg19::chr3:129226494..129226510,+#_cd591c67a774946fce8040e1fcc19d37p@chr3:129226494..129226510, +
5.02e-99FFCP PHASE1:Hg19::chr14:38064198..38064200,-#_f8be0a99a6db70240ef522cd0622405cp11@FOXA1
5.02e-99FFCP PHASE2:Hg19::chr14:38064198..38064200,-#_f8be0a99a6db70240ef522cd0622405cp11@FOXA1
1.55e-98FFCP PHASE1:Hg19::chr19:15674459..15674486,+#_5a090d3970965866baf44bef256f598cp@chr19:15674459..15674486, +
1.55e-98FFCP PHASE1:Hg19::chr10:9012105..9012111,+#_5a090d3970965866baf44bef256f598cp3@ENST00000456526
1.55e-98FFCP PHASE2:Hg19::chr1:96504230..96504238,-#_5a090d3970965866baf44bef256f598cp@chr1:96504230..96504238, -
1.55e-98FFCP PHASE2:Hg19::chr10:9012105..9012111,+#_5a090d3970965866baf44bef256f598cp3@ENST00000456526
1.55e-98FFCP PHASE1:Hg19::chr10:19498455..19498482,+#_5a090d3970965866baf44bef256f598cp@chr10:19498455..19498482, +
1.55e-98FFCP PHASE2:Hg19::chr19:15674459..15674486,+#_5a090d3970965866baf44bef256f598cp@chr19:15674459..15674486, +
1.55e-98FFCP PHASE1:Hg19::chr17:65990543..65990553,-#_5a090d3970965866baf44bef256f598cp@chr17:65990543..65990553, -
1.55e-98FFCP PHASE2:Hg19::chr10:19498455..19498482,+#_5a090d3970965866baf44bef256f598cp@chr10:19498455..19498482, +
1.55e-98FFCP PHASE2:Hg19::chr13:23583578..23583586,+#_5a090d3970965866baf44bef256f598cp@chr13:23583578..23583586, +
1.55e-98FFCP PHASE1:Hg19::chr1:96504230..96504238,-#_5a090d3970965866baf44bef256f598cp@chr1:96504230..96504238, -
1.55e-98FFCP PHASE1:Hg19::chr13:23583578..23583586,+#_5a090d3970965866baf44bef256f598cp@chr13:23583578..23583586, +
1.55e-98FFCP PHASE2:Hg19::chr17:65990543..65990553,-#_5a090d3970965866baf44bef256f598cp@chr17:65990543..65990553, -
4.23e-89FFCP PHASE1:Hg19::chr8:91871545..91871568,-#_1ab38526773238e1fa161d255c898fc5p3@ENST00000517884
4.23e-89FFCP PHASE2:Hg19::chr8:91871545..91871568,-#_1ab38526773238e1fa161d255c898fc5p3@ENST00000517884
7.73e-89FFCP PHASE2:Hg19::chr3:161089631..161089635,+#_172d349475872cd4c235ebe7353c3a1ep@chr3:161089631..161089635, +
7.73e-89FFCP PHASE1:Hg19::chr3:161089631..161089635,+#_172d349475872cd4c235ebe7353c3a1ep@chr3:161089631..161089635, +
1.46e-88FFCP PHASE2:Hg19::chr10:8091813..8091823,+#_b1c68c6bb8a602ecb7d94433d8f59e7cp@chr10:8091813..8091823, +
1.46e-88FFCP PHASE1:Hg19::chr10:8091813..8091823,+#_b1c68c6bb8a602ecb7d94433d8f59e7cp@chr10:8091813..8091823, +
2.57e-88FFCP PHASE2:Hg19::chr15:88119982..88120003,+#_4bdf5f59ffa8c33c8f722ede1c36e942p2@LINC00052
2.57e-88FFCP PHASE1:Hg19::chr15:88119982..88120003,+#_4bdf5f59ffa8c33c8f722ede1c36e942p2@LINC00052
5.61e-88FFCP PHASE2:Hg19::chr1:6488281..6488301,+#_3a6345ad1d9640e656319e6295fac5a4p@chr1:6488281..6488301, +
5.61e-88FFCP PHASE1:Hg19::chr1:6488281..6488301,+#_3a6345ad1d9640e656319e6295fac5a4p@chr1:6488281..6488301, +
1.74e-79FFCP PHASE1:Hg19::chr8:95653861..95653872,+#_d73b77484e1ac8ac46a14bec39380141p10@ESRP1
1.74e-79FFCP PHASE2:Hg19::chr8:95653861..95653872,+#_d73b77484e1ac8ac46a14bec39380141p10@ESRP1
1.21e-74FFCP PHASE1:Hg19::chr16:78085184..78085211,+#_ea10f6afebaa895acec78d498b3a2fe7p@chr16:78085184..78085211, +
1.21e-74FFCP PHASE1:Hg19::chr12:53359307..53359335,+#_ea10f6afebaa895acec78d498b3a2fe7p@chr12:53359307..53359335, +
1.21e-74FFCP PHASE2:Hg19::chr12:53359307..53359335,+#_ea10f6afebaa895acec78d498b3a2fe7p@chr12:53359307..53359335, +
1.21e-74FFCP PHASE2:Hg19::chr16:78085184..78085211,+#_ea10f6afebaa895acec78d498b3a2fe7p@chr16:78085184..78085211, +
1.56e-74FFCP PHASE1:Hg19::chr1:150953891..150953894,+#_6d32afba09e07c6385e4e8ecb183311fp@chr1:150953891..150953894, +
1.56e-74FFCP PHASE2:Hg19::chr1:150953891..150953894,+#_6d32afba09e07c6385e4e8ecb183311fp@chr1:150953891..150953894, +
2.58e-74FFCP PHASE2:Hg19::chr14:100485738..100485745,+#_13d72f4d508867feefdc4db123698f65p37@EVL
2.58e-74FFCP PHASE2:Hg19::chr11:61280885..61280904,-#_13d72f4d508867feefdc4db123698f65p@chr11:61280885..61280904, -
2.58e-74FFCP PHASE1:Hg19::chr14:100485738..100485745,+#_13d72f4d508867feefdc4db123698f65p37@EVL
2.58e-74FFCP PHASE2:Hg19::chr9:137258939..137258945,+#_13d72f4d508867feefdc4db123698f65p@chr9:137258939..137258945, +
2.58e-74FFCP PHASE1:Hg19::chr11:61280885..61280904,-#_13d72f4d508867feefdc4db123698f65p@chr11:61280885..61280904, -
2.58e-74FFCP PHASE1:Hg19::chr9:137258939..137258945,+#_13d72f4d508867feefdc4db123698f65p@chr9:137258939..137258945, +
7.4e-73FFCP PHASE1:Hg19::chr14:38065203..38065215,-#_22283f2d0481dae1d809aa6cef6f1620p9@FOXA1
7.4e-73FFCP PHASE2:Hg19::chr14:38065203..38065215,-#_22283f2d0481dae1d809aa6cef6f1620p9@FOXA1
3.22e-72FFCP PHASE2:Hg19::chr20:49241036..49241049,-#_aca235e6285e081137059acc8240cb45p@chr20:49241036..49241049, -
3.22e-72FFCP PHASE1:Hg19::chr20:49241036..49241049,-#_aca235e6285e081137059acc8240cb45p@chr20:49241036..49241049, -
4.11e-67FFCP PHASE2:Hg19::chr14:105267423..105267443,+#_3d9172a18a33531674c4379c922bb4abp2@ZBTB42
4.11e-67FFCP PHASE1:Hg19::chr14:105267423..105267443,+#_3d9172a18a33531674c4379c922bb4abp2@ZBTB42
9.57e-67FFCP PHASE1:Hg19::chr10:8096323..8096329,-#_7421b34e04c8dc3e4ec765259495b9a3p@chr10:8096323..8096329, -
9.57e-67FFCP PHASE2:Hg19::chr10:8096323..8096329,-#_7421b34e04c8dc3e4ec765259495b9a3p@chr10:8096323..8096329, -
2.4e-66FFCP PHASE1:Hg19::chr20:49347538..49347547,-#_8d42a480445c8bb597ef30fbdd0b4a1fp@chr20:49347538..49347547, -
2.4e-66FFCP PHASE1:Hg19::chr10:109305043..109305046,+#_8d42a480445c8bb597ef30fbdd0b4a1fp@chr10:109305043..109305046, +
2.4e-66FFCP PHASE2:Hg19::chr9:140506839..140506847,+#_8d42a480445c8bb597ef30fbdd0b4a1fp9@ARRDC1
2.4e-66FFCP PHASE2:Hg19::chr10:109305043..109305046,+#_8d42a480445c8bb597ef30fbdd0b4a1fp@chr10:109305043..109305046, +
2.4e-66FFCP PHASE1:Hg19::chr10:118030368..118030379,+#_8d42a480445c8bb597ef30fbdd0b4a1fp@chr10:118030368..118030379, +
2.4e-66FFCP PHASE1:Hg19::chr10:9238697..9238718,-#_8d42a480445c8bb597ef30fbdd0b4a1fp@chr10:9238697..9238718, -
2.4e-66FFCP PHASE1:Hg19::chr7:80551671..80551680,-#_8d42a480445c8bb597ef30fbdd0b4a1fp38@SEMA3C
2.4e-66FFCP PHASE2:Hg19::chr10:118030368..118030379,+#_8d42a480445c8bb597ef30fbdd0b4a1fp@chr10:118030368..118030379, +

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