EntrezGene:67338

Symbol:	Rffl
Description:	ring finger and FYVE like domain containing protein
Synonyms:	1700051E09Rik, 4930516L10Rik, BG080975, Carp2
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:67338 MGI:1914588 Ensembl:ENSMUSG00000020696 Vega:OTTMUSG00000000906
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr11:82642526..82642544,-	p3@Rffl
Mm9::chr11:82659337..82659358,-	p2@Rffl
Mm9::chr11:82659372..82659402,-	p4@Rffl
Mm9::chr11:82659409..82659425,-	p7@Rffl
Mm9::chr11:82684589..82684600,-	p9@Rffl
Mm9::chr11:82684608..82684623,-	p5@Rffl
Mm9::chr11:82684635..82684685,-	p1@Rffl
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Rffl	p2@Rffl	p3@Rffl	p4@Rffl	p5@Rffl

Sample	p1@Rffl	p2@Rffl	p3@Rffl	p4@Rffl	p5@Rffl
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	74.12	1.76	0.00	15.88	8.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	59.23	0.00	0.00	6.31	12.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	54.64	0.68	0.00	9.56	10.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	50.22	0.42	0.00	4.60	9.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	39.79	1.05	0.00	2.09	5.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	35.16	0.78	0.00	1.56	9.38
spleen, neonate N25.CNhs11099.1354-25G3	25.39	4.12	0.00	12.58	0.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	24.48	3.50	0.00	9.09	0.00
liver, embryo E16.CNhs10523.462-17F5	24.12	0.72	0.00	7.24	0.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	23.08	3.24	0.00	10.73	0.20
placenta, adult pregnant day17.CNhs10464.577-18G3	21.18	7.20	0.00	5.51	1.91
medulla oblongata, neonate N30.CNhs11200.1396-42A3	21.10	6.21	0.00	1.41	1.99
liver, embryo E18.CNhs10579.499-43G4	19.56	1.15	0.00	2.30	0.58
amnion, adult pregnant day17.5.CNhs10488.583-22A8	19.53	1.73	0.00	2.22	1.24
spleen, neonate N10.CNhs11116.752-24D1	19.40	3.77	0.00	10.93	0.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	18.65	2.33	0.00	4.66	0.67
liver, embryo E15.CNhs10520.433-16D7	17.65	1.22	0.00	5.07	0.61
spleen, neonate N20.CNhs11112.824-19H1	17.50	3.28	0.00	6.83	0.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	17.29	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	16.61	1.23	0.00	0.62	0.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	16.55	0.00	0.00	0.00	1.84
bone (os femoris), neonate N16.CNhs11225.1525-43A6	16.34	1.10	0.00	1.99	0.22
spleen, adult.CNhs10465.25-2G2	16.23	1.37	0.00	6.49	1.03
liver, embryo E17.CNhs10510.481-18A3	15.53	1.53	0.00	4.84	1.53
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	15.36	3.91	0.00	0.56	1.95
spinal cord, adult.CNhs10505.24-13C9	15.02	10.01	0.00	2.78	1.67
liver, embryo E14.CNhs10594.409-16E1	14.39	3.15	0.00	6.07	0.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	14.33	0.00	0.00	0.00	1.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	14.32	3.30	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	14.15	2.65	0.00	1.77	2.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	14.04	0.00	0.00	0.00	8.43
liver, adult pregnant day01.CNhs10466.508-5B2	13.64	1.78	0.00	1.48	0.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	13.60	10.20	0.00	4.76	0.68
liver, embryo E13.CNhs10524.378-3H6	13.37	1.38	0.00	3.73	1.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	13.33	0.58	0.00	0.00	3.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	13.03	0.00	0.00	0.00	1.34
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	13.00	1.95	0.00	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	12.94	2.88	0.00	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	12.91	0.86	0.00	0.86	1.72
kidney, neonate N10.CNhs11206.758-6D5	12.20	0.13	0.00	0.00	0.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	11.94	0.70	0.00	2.11	0.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	11.69	2.49	0.12	2.11	0.87
kidney, neonate N25.CNhs11122.1353-25F3	11.62	0.16	0.00	0.00	0.31
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	11.52	3.69	0.00	2.00	0.92
stomach, adult.CNhs10503.33-1H6	11.46	0.95	0.00	0.00	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	11.36	2.60	0.00	1.14	1.14
liver, neonate N00.CNhs11117.641-24F4	11.35	0.81	0.00	2.27	0.32
lung, neonate N00.CNhs11224.640-42C6	11.32	0.00	0.00	0.00	0.78
skin, neonate N10.CNhs11108.762-6C4	11.00	0.16	0.00	0.82	1.31
spleen, embryo E18.CNhs11011.1271-21F2	10.93	0.74	0.00	2.04	1.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	10.80	3.00	0.00	1.20	3.00
intestine, neonate N20.CNhs11187.827-18D1	10.79	0.00	0.00	0.00	0.00
stomach, neonate N25.CNhs11104.1355-25E4	10.73	0.26	0.00	1.05	0.26
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	10.61	0.85	0.00	0.42	2.12
vesicular gland, adult.CNhs10491.51-27F8	10.53	4.51	0.00	1.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	10.49	0.00	0.00	0.00	1.57
kidney, neonate N00.CNhs11214.646-21G7	10.38	0.28	0.00	0.00	0.84
mammary gland, adult lactating day02.CNhs10480.595-22B6	10.33	0.98	0.00	0.00	0.98
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	10.28	1.26	4.57	1.14	0.34
stomach, neonate N03.CNhs11193.1340-24B8	10.25	0.40	0.00	0.67	0.27
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	10.24	2.75	0.00	1.22	1.68
stomach, neonate N07.CNhs11210.718-18A9	10.17	1.07	0.00	0.91	0.83
kidney, embryo E16.CNhs10584.464-22A5	10.14	0.00	0.00	1.13	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	10.06	1.32	0.00	1.92	1.80
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	9.96	2.17	0.00	0.89	1.02
kidney, neonate N30.CNhs11203.1385-42H1	9.87	0.25	0.00	0.12	0.74
accessory axillary lymph node, adult.CNhs10475.1063-29H9	9.84	0.78	0.00	0.26	1.29
stomach, embryo E17.CNhs11006.1035-18D5	9.83	0.42	0.00	0.21	1.05
stomach, embryo E18.CNhs10999.1286-20C6	9.83	0.00	0.00	0.44	1.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	9.76	0.00	0.00	0.00	0.51
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	9.71	3.78	0.00	3.24	1.08
liver, neonate N10.CNhs11115.751-24B9	9.67	0.00	0.00	0.94	0.00
liver, neonate N30.CNhs11106.1382-42D1	9.65	1.45	0.00	0.48	0.00
medulla oblongata, adult.CNhs10477.17-12C2	9.63	9.47	0.00	3.69	1.93
eyeball, neonate N16.CNhs11188.777-19A2	9.57	2.33	0.00	1.03	0.52
skin, neonate N06.CNhs11097.693-20I5	9.55	0.48	0.00	0.36	0.48
kidney, neonate N20.CNhs11113.832-19I1	9.45	0.15	0.00	0.15	0.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	9.43	0.00	0.00	0.00	4.08
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	9.41	0.45	0.00	1.79	0.00
lung, neonate N10.CNhs11219.750-23E6	9.41	0.00	0.00	0.16	0.48
lung, neonate N20.CNhs11109.822-18A4	9.34	0.00	0.00	0.00	0.98
cecum, adult.CNhs10467.37-13H4	9.32	0.00	0.00	0.00	1.86
lung, neonate N30.CNhs11133.1394-42H2	9.26	0.14	0.00	0.14	0.29
liver, embryo E12.CNhs10601.355-15F8	9.18	1.00	0.00	2.67	0.50
kidney, embryo E18.CNhs11001.1288-20C7	9.12	0.00	0.00	0.00	0.97
GP2+ M cell, pool2.CNhs13231.11846-124I1	9.05	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	9.01	1.80	0.00	2.32	1.54
skin, neonate N00.CNhs11124.650-25G4	8.88	0.00	0.00	0.16	1.45
stomach, embryo E16.CNhs11022.459-17D4	8.86	0.32	0.00	0.11	0.22
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	8.81	1.99	0.00	3.41	0.85
corpus striatum, adult.CNhs10487.19-21D8	8.69	6.41	0.00	2.75	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	8.61	0.00	0.00	0.00	1.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	8.60	0.00	0.00	0.00	0.29
intestine, neonate N10.CNhs11098.755-23A5	8.58	0.19	0.00	0.00	0.00
lung, embryo E18.CNhs10583.1287-20I6	8.57	0.00	0.00	0.00	0.48
mammary gland, adult pregnant day19.CNhs10476.588-5H2	8.28	0.83	0.00	0.28	0.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	8.26	0.00	0.00	0.00	0.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	8.26	1.27	0.00	0.00	1.27
eyeball, adult.CNhs10484.31-12G4	8.21	1.05	0.00	0.00	0.42
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	8.13	2.41	0.00	2.16	1.65
diencephalon, adult.CNhs10482.20-12F2	8.10	6.23	0.00	2.29	1.45
spleen, embryo E16.CNhs11035.461-43C1	8.05	0.21	0.00	0.41	0.21
pancreas, neonate N00.CNhs11105.645-26G9	8.01	3.36	0.00	0.52	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	7.99	1.33	0.00	0.44	0.00
prostate, adult.CNhs10470.859-1F8	7.94	1.98	0.00	0.00	0.88
lung, neonate N06.CNhs11212.683-20E5	7.88	0.00	0.00	0.16	0.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	7.82	0.00	0.00	0.14	1.10
kidney, embryo E17.CNhs11028.483-18I2	7.74	0.41	0.00	0.20	1.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	7.68	0.35	0.00	0.00	0.35
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	7.61	0.00	0.00	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	7.58	1.52	0.00	1.01	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	7.57	0.00	0.00	0.00	1.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	7.55	0.00	0.00	0.00	0.17
skin, neonate N03.CNhs11215.662-22H3	7.48	0.24	0.00	0.12	0.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	7.48	1.02	0.00	0.51	2.89
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	7.42	0.00	0.00	0.00	0.56
stomach, neonate N30.CNhs11134.1386-42I1	7.39	0.26	0.00	0.00	0.13
GP2+ M cell, pool3.CNhs13240.11847-124I2	7.33	0.00	0.00	0.00	0.00
thymus, embryo E14.CNhs11041.402-44I4	7.30	1.01	0.00	0.61	0.81
skin, adult.CNhs10492.30-1C3	7.25	1.65	0.00	0.99	0.66
corpora quadrigemina, adult.CNhs10501.16-22A4	7.19	6.74	0.00	0.90	0.30
intestine, neonate N07.CNhs11095.720-20F2	7.16	0.20	0.00	0.20	0.20
liver, neonate N03.CNhs11123.1345-25G2	7.14	2.47	0.00	1.65	1.10
uterus, adult.CNhs10509.92-27E5	7.14	1.47	0.00	0.18	0.18
lung, neonate N07.CNhs11111.715-19A3	7.09	0.00	0.00	0.00	0.89
epididymis, adult.CNhs10490.58-23B2	7.08	1.01	0.25	0.25	0.76
liver, neonate N07.CNhs11103.716-20H2	7.07	1.86	0.00	0.74	0.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	7.07	4.04	0.00	1.51	1.26
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	7.06	0.00	0.00	0.34	2.02
testis, embryo E16.CNhs11033.470-26G5	7.00	0.00	0.00	0.19	0.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	6.96	0.82	0.00	0.00	0.41
whole body, neonate N10.CNhs10518.761-6B4	6.96	0.23	0.00	0.93	0.46
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	6.88	2.25	4.35	1.69	0.28
forelimb, embryo E13.CNhs10589.384-1E2	6.86	0.00	0.00	0.00	0.70
placenta, adult pregnant day10.CNhs10472.539-13I7	6.81	2.11	0.00	0.70	1.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	6.80	0.43	40.91	0.60	0.17
thymus, embryo E17.CNhs10581.478-18C1	6.80	0.54	0.00	0.18	0.18
bone (os femoris), neonate N20.CNhs11195.1350-25C3	6.79	2.42	0.00	6.30	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	6.79	0.00	0.00	0.00	0.41
intestine, neonate N30.CNhs11131.1384-42G1	6.77	0.00	0.00	0.20	0.00
lung, neonate N25.CNhs11119.1359-25C7	6.73	0.17	0.00	0.17	0.17
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	6.72	0.23	0.00	0.46	0.35
intestine, embryo E18.CNhs10526.1289-20F7	6.66	0.00	0.00	0.00	0.19
forelimb, embryo E17.CNhs10598.1517-43C4	6.62	0.00	0.00	0.00	1.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	6.58	0.98	0.00	1.40	1.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	6.57	0.00	0.00	0.57	0.57
Mouse Microglia, donor2.CNhs12634.11736-123E8	6.53	0.77	0.00	0.38	0.00
testis, neonate N07.CNhs11222.726-26I4	6.51	0.52	0.00	0.00	0.52
testis, neonate N10.CNhs11204.763-44D9	6.50	0.21	0.00	0.00	1.05
cerebellum, neonate N30.CNhs11135.1395-42I2	6.49	1.26	0.00	0.00	0.21
oviduct, adult pregnant day01.CNhs10500.988-6G6	6.43	0.16	0.00	0.16	0.33
thymus, neonate N30.CNhs11132.1393-42G2	6.43	0.23	0.00	0.70	0.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	6.42	0.00	0.00	1.28	0.00
thymus, neonate N07.CNhs11211.713-19D3	6.40	0.30	0.00	0.23	0.53
thymus, embryo E15.CNhs11005.430-45I2	6.37	0.62	0.00	0.41	0.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	6.36	1.24	0.00	0.97	3.04
ovary, neonate N00.CNhs11217.1299-22I4	6.35	0.00	0.00	0.16	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	6.30	0.45	0.00	0.00	0.45
lung, embryo E17.CNhs10605.480-44A6	6.20	0.17	0.00	0.00	0.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	6.19	1.69	0.00	1.69	0.56
pancreas, neonate N01.CNhs11138.1531-43D7	6.18	2.18	0.00	0.36	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	6.18	0.00	0.00	0.41	0.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	6.17	0.26	0.00	0.00	0.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	6.16	0.00	0.00	0.00	0.17
thymus, embryo E16.CNhs11002.456-26C5	6.11	0.52	0.00	0.65	0.91
ovary, adult.CNhs10507.91-2I7	6.10	0.85	0.00	0.43	0.71
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	6.08	0.00	0.00	0.00	0.16
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	6.06	1.83	0.00	2.54	0.42
Ileum epithelium, pool2.CNhs13232.10253-104C1	6.05	0.00	0.00	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	6.04	0.00	0.00	0.00	0.13
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	6.03	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	6.01	0.00	0.00	0.00	0.00
urinary bladder, adult.CNhs10481.879-12E4	5.99	0.39	0.00	0.39	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	5.96	0.40	0.00	0.10	0.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	5.93	0.99	0.00	0.00	0.99
liver, neonate N25.CNhs11198.1368-26H1	5.92	1.79	0.00	1.26	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	5.89	0.00	0.00	0.46	0.31
bone (os femoris), neonate N02.CNhs11227.1985-43F5	5.82	0.49	0.00	0.49	0.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	5.72	0.00	0.00	0.00	0.41
kidney, embryo E15.CNhs10997.434-16F8	5.71	0.11	0.00	0.34	0.91
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	5.70	0.00	0.00	0.00	2.68
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	5.67	0.22	0.00	0.00	0.65
vagina, adult.CNhs10502.89-27D5	5.57	1.07	0.00	0.21	0.21
small intestine, neonate N16.CNhs11114.790-21I1	5.54	0.00	0.00	0.00	0.29
testis, embryo E13.CNhs11031.389-23F5	5.53	0.15	0.00	0.00	1.05
kidney, embryo E14.CNhs10606.411-4I9	5.50	0.19	0.00	0.00	0.19
forelimb, embryo E12.CNhs10600.359-14H2	5.48	0.00	0.00	0.00	0.57
pancreas, embryo E16.CNhs11003.460-26E5	5.47	0.94	0.00	0.75	0.38
testis, embryo E15.CNhs11034.443-27C5	5.46	0.17	0.00	0.00	0.50
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	5.44	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	5.37	0.00	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	5.32	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	5.32	0.00	0.00	0.53	0.53
adrenal gland, embryo E17.CNhs11043.1263-45I1	5.30	3.69	0.00	0.23	0.23
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	5.28	0.23	0.00	0.00	0.23
intestine, neonate N06.CNhs11102.688-20B8	5.28	0.25	0.00	0.25	0.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	5.28	0.75	0.00	0.75	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	5.27	4.22	0.00	3.16	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	5.22	0.24	0.00	0.12	0.47
whole body, embryo E17.5.CNhs10513.490-9F9	5.21	0.00	0.00	0.39	0.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	5.19	0.51	0.00	0.10	0.61
gonad, embryo E13.CNhs11044.1564-45I6	5.17	0.60	0.00	0.20	0.80
whole body, neonate N00.CNhs10525.657-19C2	5.16	0.21	0.00	0.21	0.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	5.12	0.18	0.00	1.65	0.73
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	5.10	0.00	0.00	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	5.09	0.30	0.00	0.90	0.30
eyeball, neonate N02.CNhs11205.1551-44G8	5.06	1.03	0.00	0.09	0.47
thymus, adult.CNhs10471.38-12B5	5.06	0.95	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	5.05	0.06	0.00	0.34	0.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	5.02	0.10	0.00	0.10	0.49
thymus, neonate N25.CNhs11125.1362-25G7	5.00	0.38	0.00	0.48	0.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	4.99	0.19	0.00	0.66	0.28
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	4.96	0.92	0.00	0.55	0.55
intestinal mucosa, adult.CNhs10506.860-29I3	4.96	0.33	0.00	0.00	0.33
heart, neonate N16.CNhs11209.782-15G1	4.95	0.08	0.00	0.16	0.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	4.94	0.85	0.00	0.17	0.34
intestine, neonate N01.CNhs11192.1322-23E9	4.94	0.00	0.00	0.00	0.33
stomach, embryo E12.CNhs10588.356-43E3	4.90	0.16	0.00	0.00	0.63
stomach, embryo E15.CNhs10603.1252-16G8	4.88	0.81	0.00	0.61	0.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	4.87	0.26	0.00	0.58	0.13
eyeball, embryo E17.CNhs11023.1261-18D4	4.82	0.45	0.00	0.15	0.30
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	4.82	0.17	0.00	0.34	0.51
thymus, neonate N20.CNhs11186.820-7A2	4.78	1.07	0.00	0.19	0.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	4.77	0.00	0.00	0.24	0.24
intestine, adult.CNhs10496.178-9A3	4.76	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	4.76	0.00	0.00	0.48	0.00
intestine, neonate N00.CNhs11126.644-26D1	4.75	0.00	0.00	0.00	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	4.72	1.18	0.00	1.18	0.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	4.70	0.78	0.00	0.00	0.52
lung, embryo E16.CNhs10998.458-17B6	4.69	0.00	0.00	0.00	0.23
uterus, adult pregnant day19.CNhs10497.590-15F5	4.69	0.56	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	4.68	0.26	0.00	0.26	0.26
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	4.65	0.00	0.00	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	4.64	1.10	0.00	0.44	0.22
pancreas, neonate N02.CNhs11139.1539-43D8	4.63	2.85	0.00	0.71	0.00
whole body, neonate N06.CNhs10515.692-21D1	4.63	0.88	0.00	1.99	0.22
lung, adult.CNhs10474.28-22B1	4.62	0.37	0.00	0.18	0.92
eyeball, neonate N01.CNhs11140.1532-43E7	4.61	0.77	0.00	0.00	0.38
heart, neonate N25.CNhs11196.1351-25D3	4.61	0.00	0.00	0.00	0.00
colon, adult.CNhs10468.36-18H7	4.60	0.26	0.00	0.51	0.26
thymus, neonate N02.CNhs11181.1541-43F8	4.57	0.60	0.00	0.48	0.48
testis, embryo E17.CNhs11029.486-18I5	4.52	0.52	0.00	0.00	0.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	4.51	0.29	0.00	0.87	0.44
aorta, adult.CNhs10498.46-23H1	4.48	0.58	0.00	0.14	0.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	4.46	0.51	0.00	0.41	0.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	4.44	0.22	0.00	0.44	0.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	4.42	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	4.41	0.13	0.00	0.50	0.88
cerebellum, adult.CNhs10494.15-8B2	4.39	2.34	0.00	0.29	0.29
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	4.35	0.00	0.00	0.00	2.90
intestine, neonate N25.CNhs11121.1352-25E3	4.32	0.00	0.00	0.22	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	4.31	0.25	0.00	0.51	0.25
heart, neonate N10.CNhs11118.749-24G1	4.27	0.00	0.00	0.00	0.33
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	4.27	0.44	0.00	0.59	0.15
whole body, embryo E17.CNhs10517.475-3I5	4.25	0.25	0.00	0.00	0.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	4.24	1.41	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	4.24	0.19	0.00	0.19	0.00
thymus, neonate N10.CNhs11194.748-24E4	4.23	0.10	0.00	0.30	0.81
hippocampus, adult.CNhs10478.13-16E8	4.21	3.36	0.00	0.42	0.21
whole body, neonate N01.CNhs10576.659-23C6	4.21	0.38	0.00	0.19	0.19
pancreas, neonate N30.CNhs11182.1548-44H5	4.13	1.03	0.00	3.09	0.00
whole body, embryo E14.5.CNhs10578.420-27D2	4.13	0.73	0.00	2.19	0.00
pancreas, neonate N16.CNhs11136.787-43B6	4.11	1.26	0.00	3.48	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	4.11	0.34	0.00	0.69	0.69
heart, neonate N20.CNhs11127.821-26I6	4.09	0.00	0.00	0.00	0.58
pituitary gland, embryo E14.CNhs11037.398-44A5	4.07	1.07	0.00	0.21	0.86
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	4.04	0.00	0.00	0.00	0.29
intestine, embryo E16.CNhs10585.463-22H4	4.03	0.40	0.00	0.20	0.00
eyeball, neonate N00.CNhs11207.633-15C6	4.01	0.75	0.00	0.20	0.20
intestine, embryo E17.CNhs10582.482-18D3	4.00	0.00	0.00	0.00	0.22
pancreas, embryo E18.CNhs10580.1535-43I7	4.00	4.92	0.00	0.92	0.31
pancreas, adult.CNhs10486.34-16E4	3.98	5.31	0.00	2.65	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	3.90	1.06	0.00	0.18	0.53
pancreas, embryo E14.CNhs11012.405-44F4	3.88	0.24	0.00	0.00	0.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	3.85	0.32	0.00	0.96	0.00
cortex, neonate N30.CNhs11107.1392-42F2	3.84	0.77	0.00	0.00	0.51
eyeball, embryo E15.CNhs10593.426-16C9	3.78	0.00	0.00	0.00	0.72
thymus, embryo E18.CNhs10595.1273-19G4	3.77	0.20	0.00	0.99	0.99
whole body, embryo E14.CNhs10519.395-14B1	3.77	0.00	0.00	0.63	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	3.75	0.19	0.00	0.56	0.19
forelimb, embryo E14.CNhs10577.413-26A8	3.73	0.00	0.00	0.00	0.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	3.71	0.62	0.00	0.82	0.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	3.70	0.43	0.00	0.14	0.28
cortex, adult.CNhs10473.12-14D5	3.65	2.78	0.00	0.17	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	3.65	1.52	0.00	0.30	0.30
thymus, neonate N06.CNhs11197.681-26C4	3.63	0.20	0.00	0.71	0.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	3.62	1.04	0.00	0.52	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	3.61	0.52	0.00	0.00	0.52
whole body, embryo E13.CNhs10512.372-23H2	3.59	0.34	0.00	0.34	0.34
whole body, embryo E18.CNhs10516.493-3B3	3.51	0.47	0.00	0.47	0.23
forelimb, embryo E11.CNhs10596.335-25E2	3.45	0.00	0.00	0.00	0.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	3.43	1.37	0.00	0.00	0.00
pituitary gland, adult.CNhs10493.21-1G8	3.40	8.85	0.00	1.02	0.00
forelimb, embryo E15.CNhs11007.437-20E7	3.34	0.00	0.00	0.00	0.28
adrenal gland, embryo E14.CNhs11038.406-44C5	3.30	1.39	0.00	0.52	0.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	3.27	0.17	0.00	0.52	0.34
lung, embryo E14.CNhs10604.404-26F8	3.26	0.00	0.00	0.00	0.49
lung, embryo E15.CNhs11020.432-17C5	3.23	0.00	0.00	0.00	0.00
lung, embryo E12.CNhs10522.354-16G2	3.22	0.00	0.00	0.00	0.38
olfactory brain, adult.CNhs10489.18-22I9	3.21	0.64	0.00	0.64	0.00
testis, embryo E18.CNhs11027.503-18G5	3.21	0.51	0.00	0.00	0.84
Mouse Granule cells, donor3.CNhs12108.11636-122C7	3.17	0.00	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	3.14	0.00	0.00	0.27	0.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	3.13	0.00	0.00	0.00	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	3.13	1.32	0.00	0.00	0.16
submandibular gland, adult.CNhs10469.59-29C1	3.11	0.00	0.00	0.62	0.00
thymus, neonate N03.CNhs11137.2104-43C7	3.10	0.89	0.00	0.59	0.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	3.04	1.27	0.00	0.25	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	3.03	0.00	0.00	0.00	0.15
heart, embryo E17.CNhs11025.479-18E5	3.02	0.23	0.00	0.23	0.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	3.02	0.76	0.00	0.00	1.51
heart, neonate N03.CNhs11221.1349-25I2	2.96	0.16	0.00	0.00	0.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	2.95	0.29	0.00	0.00	0.29
tongue, adult.CNhs10499.32-1B4	2.95	0.91	0.00	0.45	0.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	2.94	0.14	0.00	0.14	0.14
adrenal gland, neonate N00.CNhs11191.1311-23C1	2.94	2.23	0.00	0.59	0.35
pituitary gland, embryo E16.CNhs11036.449-43F6	2.85	0.71	0.00	0.00	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	2.85	1.01	0.00	0.17	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	2.85	0.27	0.00	0.41	0.27
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	2.84	0.00	0.00	0.00	0.00
heart, embryo E14.CNhs10597.403-26D4	2.84	0.47	0.00	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	2.82	4.16	0.00	0.59	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	2.81	0.00	0.00	0.56	0.56
whole body, embryo E12.CNhs10587.857-27C9	2.79	0.80	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	2.70	0.68	0.00	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	2.69	0.41	0.00	0.21	0.00
heart, embryo E18.CNhs11030.1283-20G3	2.68	0.00	0.00	0.00	0.27
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	2.63	1.17	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	2.63	0.00	0.00	0.79	0.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	2.59	0.00	0.00	0.22	0.00
intestine, embryo E15.CNhs10602.976-16D8	2.58	0.13	0.00	0.00	0.00
heart, neonate N00.CNhs11213.639-21E3	2.57	0.23	0.00	0.00	0.00
pituitary gland, embryo E13.CNhs11009.370-44C7	2.46	0.78	0.00	0.13	0.52
testis, neonate N00.CNhs11189.1300-22B7	2.46	0.82	0.00	0.12	0.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	2.43	0.40	0.00	0.00	0.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	2.42	0.19	0.00	0.00	0.19
testis, neonate N20.CNhs11110.839-18H3	2.42	0.24	1.21	0.00	0.48
whole body, embryo E16.CNhs10514.453-14F2	2.39	0.55	0.00	0.55	0.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	2.37	0.00	0.00	0.00	0.00
eyeball, embryo E12.CNhs11016.345-16C6	2.34	0.39	0.00	0.13	0.13
intestine, embryo E13.CNhs11010.381-16D5	2.32	0.93	0.00	0.70	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	2.30	0.33	0.00	0.16	0.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	2.29	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	2.27	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	2.26	0.00	0.00	0.56	0.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	2.21	0.95	0.00	0.32	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	2.16	0.43	0.00	0.00	0.00
heart, embryo E15.CNhs11017.431-16C8	2.16	0.20	0.00	0.00	0.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	2.15	1.43	0.00	0.24	0.00
adrenal gland, neonate N25.CNhs11223.1377-27I3	2.14	2.26	0.00	0.25	0.25
corpus striatum, neonate N00.CNhs11226.630-43F1	2.14	0.13	0.00	0.00	0.25
ovary, embryo E18.CNhs11040.505-44H7	2.14	0.53	0.00	0.00	0.18
intestine, embryo E12.CNhs11019.1251-16I5	2.13	0.21	0.00	0.00	0.85
pancreas, embryo E15.CNhs11042.1556-45F2	2.12	0.60	0.00	0.00	0.60
Ileum epithelium, pool1.CNhs13199.10252-104B9	2.09	0.00	0.00	0.00	0.00
testis, neonate N30.CNhs11130.1391-42E2	2.02	0.00	118.38	0.00	0.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	2.02	0.25	0.00	0.51	0.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	1.97	0.00	0.00	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	1.96	2.86	0.00	1.06	0.15
hippocampus, neonate N00.CNhs11228.627-43G1	1.85	0.00	0.00	0.00	0.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	1.84	0.00	0.00	0.46	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	1.83	1.52	0.00	0.30	1.22
Mouse Schwann, donor2.CNhs12573.11746-123F9	1.81	0.30	0.00	0.00	0.00
heart, embryo E13.CNhs11013.376-3I9	1.80	0.54	0.00	0.00	0.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	1.78	0.00	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	1.70	0.57	0.00	0.28	0.00
whole body, embryo E11.CNhs11014.324-5I8	1.66	0.21	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	1.58	0.40	0.00	0.00	0.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	1.56	0.00	0.00	0.00	0.00
heart, embryo E16.CNhs11021.457-17C6	1.54	0.15	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	1.52	0.00	0.00	0.00	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	1.44	0.36	0.00	0.00	0.54
heart, embryo E12.CNhs11015.353-12F5	1.41	0.23	0.00	0.94	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	1.35	0.14	0.00	0.00	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	1.21	0.00	0.00	0.00	0.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	1.19	0.00	0.00	0.09	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	1.17	0.78	0.00	0.00	0.78
testis, adult.CNhs10504.57-7G5	1.13	0.00	332.58	0.00	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	1.10	0.00	0.00	0.44	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	1.04	0.00	0.00	0.52	0.52
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	0.89	1.34	0.00	0.00	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	0.79	0.13	0.00	0.00	0.00
eyeball, embryo E14.CNhs10521.399-16E2	0.69	0.23	0.00	0.23	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	0.53	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	0.45	0.90	0.00	0.90	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	0.00	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	0.00	7.11	0.00	0.00	0.00

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p1@Rffl
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p5@Rffl

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	67338
LocusTag:	RP23-316C11.8
chromosome:	11
map location:	11, 11 B5, 11;;11 B5
type of gene:	protein-coding
Symbol from nomenclature authority:	Rffl
Full name from nomenclature authority:	ring finger and FYVE like domain containing protein
Nomenclature status:	O
Other designations:	E3 ubiquitin-protein ligase rififylin, RING finger and FYVE-like domain-containing protein 1, fring, rififylin, E3 ubiquitin-protein ligase rififylin;;RING finger and FYVE-like domain-containing protein 1;;fring;;rififylin
Modification date:	15.01.2012