FFCP PHASE1:Hg19::chr12:66218378..66218401,+
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| Short description: | p6@HMGA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_HMGA2_5end |
| Coexpression cluster: | C749_Wilms_rhabdomyosarcoma_medulloblastoma_fibrous_retinoblastoma_endometrial_schwannoma |
| Association with transcript: | 138bp_to_ENST00000354636, ENST00000393578, ENST00000425208, ENST00000536545, ENST00000537275, ENST00000537429, NM_003483, NM_003484, uc001sss.1, uc001sst.1, uc001ssu.1, uc001ssv.2, uc001ssw.1, uc001ssx.2, uc010ssv.1_5end |
| EntrezGene: | HMGA2 |
| HGNC: | 5009 |
| UniProt: | Q1M182Q1M188Q1M186F5H6H0Q1M187Q1M185P52926 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p6@HMGA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 1.82e-22 | 250 |
| epithelial cell | 2.63e-15 | 253 |
| muscle precursor cell | 9.24e-12 | 58 |
| myoblast | 9.24e-12 | 58 |
| multi-potent skeletal muscle stem cell | 9.24e-12 | 58 |
| electrically responsive cell | 1.76e-11 | 61 |
| electrically active cell | 1.76e-11 | 61 |
| muscle cell | 1.24e-10 | 55 |
| mesodermal cell | 9.80e-10 | 121 |
| smooth muscle cell | 8.36e-08 | 43 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| multilaminar epithelium | 6.56e-15 | 83 |
| epithelial vesicle | 5.81e-14 | 78 |
| epithelial tube | 3.01e-13 | 117 |
| mesenchyme | 3.68e-13 | 160 |
| entire embryonic mesenchyme | 3.68e-13 | 160 |
| unilaminar epithelium | 1.33e-12 | 148 |
| cell layer | 1.48e-12 | 309 |
| somite | 4.75e-12 | 71 |
| presomitic mesoderm | 4.75e-12 | 71 |
| presumptive segmental plate | 4.75e-12 | 71 |
Showing 1 to 10 of 45 entries
