FFCP PHASE1:Hg19::chr3:112359295..112359306,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p19@CCDC80 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_19_at_CCDC80_5end |
| Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
| Association with transcript: | -17bp_to_BX647817_5end |
| EntrezGene: | CCDC80 |
| HGNC: | 30649 |
| UniProt: | Q76M96 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p19@CCDC80 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 2.92e-23 | 76 |
| multi fate stem cell | 3.39e-13 | 427 |
| somatic stem cell | 1.37e-12 | 433 |
| stem cell | 8.25e-12 | 441 |
| skin fibroblast | 2.08e-11 | 23 |
| preadipocyte | 4.04e-10 | 12 |
| muscle precursor cell | 4.89e-10 | 58 |
| myoblast | 4.89e-10 | 58 |
| multi-potent skeletal muscle stem cell | 4.89e-10 | 58 |
| smooth muscle cell | 2.11e-08 | 43 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| omentum | 1.46e-09 | 6 |
| peritoneum | 1.46e-09 | 6 |
| abdominal cavity | 1.46e-09 | 6 |
| visceral peritoneum | 1.46e-09 | 6 |
| skeletal muscle tissue | 6.85e-09 | 62 |
| striated muscle tissue | 6.85e-09 | 62 |
| myotome | 6.85e-09 | 62 |
| muscle tissue | 2.23e-08 | 64 |
| musculature | 2.23e-08 | 64 |
| musculature of body | 2.23e-08 | 64 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 4.02e-08 | 5 |
| myotonic disease | 4.02e-08 | 5 |
| muscle tissue disease | 4.02e-08 | 5 |
| myopathy | 4.02e-08 | 5 |
| muscular disease | 4.02e-08 | 5 |
| myotonic dystrophy | 4.02e-08 | 5 |
Showing 1 to 6 of 6 entries
