FFCP PHASE1:Hg19::chr6:152702229..152702236,-
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| Short description: | p35@SYNE1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_35_at_SYNE1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 118bp_to_ENST00000471834_5end |
| EntrezGene: | SYNE1 |
| HGNC: | 17089 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p35@SYNE1 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chondroblast | 8.35e-34 | 6 |
| chondrocyte | 8.35e-34 | 6 |
| GAG secreting cell | 5.74e-23 | 9 |
| carbohydrate secreting cell | 5.74e-23 | 9 |
| cardiac muscle cell | 6.76e-18 | 3 |
| cardiac muscle myoblast | 6.76e-18 | 3 |
| extracellular matrix secreting cell | 2.94e-14 | 15 |
| striated muscle cell | 8.82e-14 | 4 |
| stromal cell | 3.92e-08 | 28 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| cartilage tissue | 8.00e-18 | 3 |
| skeletal tissue | 8.00e-18 | 3 |
| thyroid gland | 3.60e-11 | 5 |
| pharyngeal pouch | 3.60e-11 | 5 |
| thyroid diverticulum | 3.60e-11 | 5 |
| pharyngeal pouch 2 | 3.60e-11 | 5 |
| thyroid primordium | 3.60e-11 | 5 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| chondrosarcoma | 2.42e-50 | 1 |
| extraosseous chondrosarcoma | 2.42e-50 | 1 |
| myxoid chondrosarcoma | 2.42e-50 | 1 |
| extraskeletal myxoid chondrosarcoma | 2.42e-50 | 1 |
| connective tissue cancer | 1.32e-09 | 6 |
| musculoskeletal system cancer | 1.32e-09 | 6 |
Showing 1 to 6 of 6 entries
