FFCP PHASE1:Hg19::chr6:152957988..152958037,-
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| Short description: | p3@SYNE1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_SYNE1_5end |
| Coexpression cluster: | C4575_Neutrophils_cerebellum_Natural_CD8_Basophils_pituitary_Eosinophils |
| Association with transcript: | 0bp_to_ENST00000367248_5end |
| EntrezGene: | SYNE1 |
| HGNC: | 17089 |
| UniProt: | F5GXQ8 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@SYNE1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD8-positive, alpha-beta T cell | 4.30e-12 | 11 |
| mature alpha-beta T cell | 3.28e-09 | 18 |
| alpha-beta T cell | 3.28e-09 | 18 |
| immature T cell | 3.28e-09 | 18 |
| mature T cell | 3.28e-09 | 18 |
| immature alpha-beta T cell | 3.28e-09 | 18 |
| granulocyte | 9.19e-09 | 8 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 9.99e-61 | 114 |
| neural tube | 2.06e-31 | 56 |
| neural rod | 2.06e-31 | 56 |
| future spinal cord | 2.06e-31 | 56 |
| neural keel | 2.06e-31 | 56 |
| regional part of nervous system | 5.19e-30 | 53 |
| regional part of brain | 5.19e-30 | 53 |
| regional part of forebrain | 2.62e-25 | 41 |
| forebrain | 2.62e-25 | 41 |
| anterior neural tube | 2.62e-25 | 41 |
Showing 1 to 10 of 48 entries
