FFCP PHASE1:Mm9::chr5:149862954..149862966,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p9@Hmgb1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Hmgb1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 59bp_to_uc009apc.1_5end |
| EntrezGene: | Hmgb1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@Hmgb1 |
|---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 1.75e-14 | 7 |
| muscle precursor cell | 5.81e-12 | 6 |
| muscle cell | 5.81e-12 | 6 |
| myoblast | 5.81e-12 | 6 |
| hepatocyte | 7.88e-10 | 5 |
| smooth muscle cell | 1.58e-09 | 3 |
| vascular associated smooth muscle cell | 1.58e-09 | 3 |
| aortic smooth muscle cell | 1.58e-09 | 3 |
| smooth muscle myoblast | 1.58e-09 | 3 |
| multi-potent skeletal muscle stem cell | 7.23e-08 | 9 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| unilaminar epithelium | 6.09e-17 | 66 |
| liver | 8.06e-12 | 22 |
| epithelial sac | 8.06e-12 | 22 |
| digestive gland | 8.06e-12 | 22 |
| epithelium of foregut-midgut junction | 8.06e-12 | 22 |
| anatomical boundary | 8.06e-12 | 22 |
| hepatobiliary system | 8.06e-12 | 22 |
| foregut-midgut junction | 8.06e-12 | 22 |
| hepatic diverticulum | 8.06e-12 | 22 |
| liver primordium | 8.06e-12 | 22 |
Showing 1 to 10 of 58 entries
