FFCP PHASE2:Hg19::chr12:66218413..66218418,+
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| Short description: | p17@HMGA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_17_at_HMGA2_5end |
| Coexpression cluster: | C749_Wilms_rhabdomyosarcoma_medulloblastoma_fibrous_retinoblastoma_endometrial_schwannoma |
| Association with transcript: | -172bp_to_ENST00000545998_5end |
| EntrezGene: | HMGA2 |
| HGNC: | 5009 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p17@HMGA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of nephron | 1.24e-08 | 15 |
| embryonic stem cell | 6.62e-08 | 5 |
| kidney cell | 1.53e-07 | 17 |
| kidney epithelial cell | 1.53e-07 | 17 |
| glomerular endothelial cell | 2.09e-07 | 5 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| nephron epithelium | 1.24e-08 | 15 |
| renal tubule | 1.24e-08 | 15 |
| nephron tubule | 1.24e-08 | 15 |
| nephron | 1.24e-08 | 15 |
| uriniferous tubule | 1.24e-08 | 15 |
| nephrogenic mesenchyme | 1.24e-08 | 15 |
| excretory tube | 4.71e-08 | 16 |
| kidney epithelium | 4.71e-08 | 16 |
| abdomen element | 9.90e-08 | 54 |
| abdominal segment element | 9.90e-08 | 54 |
Showing 1 to 10 of 10 entries
