FFCP PHASE2:Hg19::chr13:112721521..112721535,+
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| Short description: | p3@SOX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_SOX1_5end |
| Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
| Association with transcript: | -377bp_to_ENST00000330949, NM_005986, uc001vsb.1_5end |
| EntrezGene: | SOX1 |
| HGNC: | 11189 |
| UniProt: | O00570 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@SOX1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Merkel cell | 6.48e-18 | 2 |
| neuronal stem cell | 2.01e-17 | 8 |
| neural cell | 9.28e-12 | 25 |
| keratinocyte | 5.73e-08 | 5 |
| stratified squamous epithelial cell | 7.58e-07 | 6 |
| keratin accumulating cell | 7.58e-07 | 6 |
| stratified epithelial cell | 7.58e-07 | 6 |
| keratinizing barrier epithelial cell | 7.58e-07 | 6 |
| epithelial fate stem cell | 7.58e-07 | 6 |
| stratified epithelial stem cell | 7.58e-07 | 6 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| duodenum | 2.31e-12 | 2 |
| small intestine | 6.13e-08 | 4 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 3.25e-14 | 10 |
| germ cell and embryonal cancer | 5.40e-07 | 22 |
| germ cell cancer | 5.40e-07 | 22 |
Showing 1 to 3 of 3 entries
