FFCP PHASE2:Hg19::chr2:175629305..175629312,-
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| Short description: | p8@CHRNA1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_CHRNA1_5end |
| Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
| Association with transcript: | -105bp_to_ENST00000348749, NM_000079, NM_001039523, uc002ujd.2, uc002uje.2, uc002ujf.3_5end |
| EntrezGene: | CHRNA1 |
| HGNC: | 1955 |
| UniProt: | P02708Q53SH4 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p8@CHRNA1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast of gingiva | 5.15e-21 | 5 |
| chondroblast | 7.67e-18 | 6 |
| chondrocyte | 7.67e-18 | 6 |
| GAG secreting cell | 2.19e-12 | 9 |
| carbohydrate secreting cell | 2.19e-12 | 9 |
| extracellular matrix secreting cell | 5.55e-08 | 15 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| cartilage tissue | 4.27e-34 | 3 |
| skeletal tissue | 4.27e-34 | 3 |
| gingiva | 1.07e-13 | 8 |
| mouth mucosa | 5.70e-09 | 13 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| chondrosarcoma | 9.37e-99 | 1 |
| extraosseous chondrosarcoma | 9.37e-99 | 1 |
| myxoid chondrosarcoma | 9.37e-99 | 1 |
| extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
| connective tissue cancer | 7.67e-18 | 6 |
| musculoskeletal system cancer | 7.67e-18 | 6 |
Showing 1 to 6 of 6 entries
