FFCP PHASE2:Hg19::chr2:189873740..189873791,+
From FANTOM5_SSTAR
Jump to: navigation, search
Short description: | p3@COL3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL3A1_5end |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | 27bp_to_X01742_5end |
EntrezGene: | COL3A1 |
HGNC: | 2201 |
UniProt: | P02461Q6LBY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@COL3A1 |
---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 7.65e-23 | 55 |
muscle precursor cell | 7.40e-22 | 58 |
myoblast | 7.40e-22 | 58 |
multi-potent skeletal muscle stem cell | 7.40e-22 | 58 |
electrically responsive cell | 4.73e-19 | 61 |
electrically active cell | 4.73e-19 | 61 |
multi fate stem cell | 6.25e-17 | 427 |
smooth muscle cell | 1.28e-16 | 43 |
smooth muscle myoblast | 1.28e-16 | 43 |
fibroblast | 2.24e-16 | 76 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.18e-22 | 62 |
striated muscle tissue | 2.18e-22 | 62 |
myotome | 2.18e-22 | 62 |
muscle tissue | 3.66e-21 | 64 |
musculature | 3.66e-21 | 64 |
musculature of body | 3.66e-21 | 64 |
dense mesenchyme tissue | 7.62e-20 | 73 |
somite | 1.21e-19 | 71 |
presomitic mesoderm | 1.21e-19 | 71 |
presumptive segmental plate | 1.21e-19 | 71 |
Showing 1 to 10 of 43 entries