FFCP PHASE2:Hg19::chr2:55277522..55277533,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p6@RTN4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_RTN4_5end |
| Coexpression cluster: | C1911_Smooth_mesenchymal_Fibroblast_leiomyoma_Preadipocyte_Adipocyte_osteoclastoma |
| Association with transcript: | -10bp_to_ENST00000402434_5end |
| EntrezGene: | RTN4 |
| HGNC: | 14085 |
| UniProt: | F8W914 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@RTN4 |
|---|
0
20
40
60
80
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 3.74e-23 | 121 |
| fibroblast | 7.92e-15 | 76 |
| muscle precursor cell | 1.51e-14 | 58 |
| myoblast | 1.51e-14 | 58 |
| multi-potent skeletal muscle stem cell | 1.51e-14 | 58 |
| smooth muscle cell | 3.63e-14 | 43 |
| smooth muscle myoblast | 3.63e-14 | 43 |
| muscle cell | 3.68e-13 | 55 |
| embryonic cell | 6.45e-12 | 250 |
| vascular associated smooth muscle cell | 6.58e-12 | 32 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| vasculature | 1.22e-20 | 78 |
| vascular system | 1.22e-20 | 78 |
| vessel | 3.35e-20 | 68 |
| epithelial tube open at both ends | 1.74e-18 | 59 |
| blood vessel | 1.74e-18 | 59 |
| blood vasculature | 1.74e-18 | 59 |
| vascular cord | 1.74e-18 | 59 |
| mesoderm | 3.71e-18 | 315 |
| mesoderm-derived structure | 3.71e-18 | 315 |
| presumptive mesoderm | 3.71e-18 | 315 |
Showing 1 to 10 of 64 entries
