MacroAPE 1083:11-CGGGGAAATTAC

Full Name: 11-CGGGGAAATTAC,CNhs11958,BestGuess:NFkB-p65-Rel(RHD)/LPS-exp/Homer(0.731055342133736),T:406.0(7.71%),B:1569.7(3.61%),P:1e-43

Motif matrix
PO A C G T 1 43.036 231.014 65.366 66.584 2 51.968 40.194 260.246 53.592 3 22.33 12.992 341.852 28.826 4 61.712 0.406 308.56 35.322 5 17.458 3.248 375.55 9.744 6 346.318 32.074 8.526 19.082 7 349.972 14.616 38.164 3.248 8 282.982 29.232 64.148 29.638 9 3.654 39.382 17.864 345.1 10 16.24 86.884 71.456 231.42 11 309.372 29.232 24.36 43.036 12 13.804 280.546 49.126 62.524

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
YPR196W#MA0437.1	0	7.26313e-05	0.0345725	0.0685551	9	CGGGGAAATTAC	CGGAGAAAT	-
MZF1_1-4#MA0056.1	0	0.00101242	0.481914	0.466275	6	CGGGGAAATTAC	TGGGGA	+
NF-kappaB#MA0061.1	-2	0.00179962	0.856619	0.466275	10	CGGGGAAATTAC	GGGAATTTCC	+
RELA#MA0107.1	-3	0.001976	0.940575	0.466275	9	CGGGGAAATTAC	GGAAATTCCC	-
YRR1#MA0439.1	-1	0.00358466	1.7063	0.526534	11	CGGGGAAATTAC	GCGGAGATAAG	-
ZMS1#MA0441.1	2	0.00400075	1.90435	0.526534	7	CGGGGAAATTAC	TGCGGGGAA	-
YRM1#MA0438.1	-1	0.00446273	2.12426	0.526534	8	CGGGGAAATTAC	ACGGAAAT	+
sd#MA0243.1	0	0.00664744	3.16418	0.580241	12	CGGGGAAATTAC	CCGAGGAATGTC	-
REL#MA0101.1	-3	0.00676215	3.21879	0.580241	9	CGGGGAAATTAC	GGAAATCCCC	-
Dll#MA0187.1	-4	0.00936918	4.45973	0.609193	7	CGGGGAAATTAC	GTAATTA	-
OAF1#MA0348.1	1	0.00965986	4.59809	0.609193	8	CGGGGAAATTAC	TCGGAGATA	+
FEV#MA0156.1	-1	0.0108374	5.1586	0.609193	8	CGGGGAAATTAC	CAGGAAAT	+
RGT1#MA0367.1	1	0.0109301	5.20274	0.609193	10	CGGGGAAATTAC	CCGGAAAAACT	-
EDS1#MA0294.1	0	0.0109721	5.2227	0.609193	9	CGGGGAAATTAC	CGGAAAAAT	+
ELF5#MA0136.1	-1	0.0129704	6.17393	0.637588	9	CGGGGAAATTAC	AAGGAAGTA	-
NHP10#MA0344.1	2	0.013496	6.42409	0.637588	6	CGGGGAAATTAC	GCCGGGGA	+
YKL222C#MA0428.1	0	0.0140859	6.70487	0.637588	9	CGGGGAAATTAC	AACGGAAAT	+
STAT1#MA0137.2	5	0.0143303	6.82123	0.637588	10	CGGGGAAATTAC	GGTTTCCGGGAAATG	-
NFKB1#MA0105.1	-2	0.015279	7.27279	0.637588	10	CGGGGAAATTAC	GGGGAATCCCC	-
YDR026C#MA0421.1	2	0.0155365	7.39535	0.637588	8	CGGGGAAATTAC	GCCGGGTAAA	-
SPI1#MA0080.2	-2	0.017418	8.29095	0.685018	7	CGGGGAAATTAC	AGGAAGT	+
Prrx2#MA0075.1	-6	0.0182733	8.69808	0.689909	5	CGGGGAAATTAC	AATTA	+
REB1#MA0363.1	0	0.0194225	9.24512	0.691072	9	CGGGGAAATTAC	CCGGGTAAC	-
SPT23#MA0388.1	-4	0.0197684	9.40975	0.691072	8	CGGGGAAATTAC	GAAATCAA	+