Personal tools

MacroAPE 1083:7-CGTCTGA

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 7-CGTCTGA,CNhs13238,BestGuess:SMAD4_si_HM09(0.704480336550248),T:1802.0(69.47%),B:24889.5(56.61%),P:1e-40

Motif matrix
POACGT
11.8021237.9741.802560.422
21.8021.8021796.5941.802
3118.9321.8021.8021679.464
45.406989.298266.696540.6
5549.61117.1316.2181119.042
6493.74828.832960.466318.954
71248.7861.8021.802549.61

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ARG80#MA0271.110.006317213.0069915CGTCTGAGCGTCT-
ABF1#MA0265.110.0133376.3483917CGTCTGATCGTATAAAGTGATAA+
YPR015C#MA0435.1120.01725088.2113917CGTCTGATGTAAGGATTTACGTCTTCA-
bZIP910#MA0096.110.01917029.1250316CGTCTGAACGTCAT-
YAP6#MA0418.100.01960869.333717CGTCTGAGGTCTGATTACGTAAGCGAC+