Personal tools

MacroAPE 1083:AAGACTACCA,motif544

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: AAGACTACCA,motif544,CNhs12641,T:803.0(24.83%),B:12552.7(16.71%),P:1e-31

Motif matrix
POACGT
1672.11174.67928.90827.302
2686.56512.04541.75662.634
375.482101.178575.75150.589
4639.99148.98385.92128.105
5115.632592.61452.19542.559
645.77157.01320.878679.338
7582.97869.05875.48275.482
865.043621.52243.36273.073
979.497664.88426.49932.12
10713.86738.54413.65136.938

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Lag1#MA0193.1-40.005642862.68616AAGACTACCACTACCAA+
GCR1#MA0304.1-20.01240875.9065318AAGACTACCAGGCTTCCA-
FZF1#MA0298.1-40.01447166.888516AAGACTACCACTATCA+
En1#MA0027.110.01667687.93815110AAGACTACCAGAACACTACTT-