NonredundantMotifs:34

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant34
• db :SWISSREGULON
• Id :NFATC1..3.p2
• name :NFATC1
• score :0.1729565267707871
  
• External refs:

EntrezGene:NFATC1
UniProt:NFATC1

• Internal refs:

EntrezGene:NFATC1

Motif matrix

P0 A C G T 1 73.016397 93.5101009999999 20.999693 64.699776 2 146.51906 17.547087 55.544849 32.614971 3 52.666958 51.997261 108.529854 39.031894 4 109.240729 9.205907 5.558978 128.220353 5 2.713685 0 249.512282 0 6 1.7142 0 250.511767 0 7 251.308668 0 0.917299 0 8 249.568094 0 2.657873 0 9 249.673431 0.84565 1.706886 0 10 157.183663 50.194764 10.824947 34.022593 11 72.111846 44.741669 23.799103 111.573349 12 34.464015 71.735108 29.634182 116.392662