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UBERON:0000074

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Name:renal glomerulus
Namespace:FANTOM
Definition:"A capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the vertebrate kidney[GO]." [MP:0005325, Wikipedia:Glomerulus]
Xrefs:
links:

AAO:0010388
BTO:0000530
EFO:0003667
EV:0100386
FMA:15624
[1]
[2]
[ 200px-Gray1130.svg.png 200px-Gray1130.svg.png]
MA:0001657
MESH:A.05.810.453.736.520
ncithesaurus:Glomerulus
TAO:0001288
XAO:0000146

ZFA:0001288
Synonyms: "glomerular capillary tuft" RELATED [ZFA:0001288]
"glomerular tuft" RELATED []
"glomerulus" BROAD []
"glomerulus renis" RELATED LATIN [Wikipedia:Glomerulus]
"malphigian glomerulus" RELATED [BTO:0000530]
"renal corpuscle" RELATED []
Comments:ZFA - The multi-tissue structure where the glomerular basement membrane supported by mesonephric podocytes filters blood from the glomerular capillaries. TODO - split glomerulus and glomerular tuft? DONE. GUDMAP: 'Together, the Bowman遯カ蜀ア capsule and the glomerulus comprise the definitive renal corpuscle.' - here the glomerulus is part of the capsule?
Subset: vertebrate_core
Created by:Melissa Haendel
Creation date:2009-06-18T09:26:37Z

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000064(organ part),UBERON:0004120(mesoderm-derived structure),UBERON:0006554(urinary system structure)
develops_from:UBERON:0005749(glomerular tuft)
part_of:UBERON:0001229(renal corpuscle)



Children

part of:CL:0002188 (glomerular endothelial cell),UBERON:0002319 (mesangium),CL:1000746 (glomerular cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000074 (renal glomerulus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "A tuft of capillaries found in a Bowman's capsule in which waste products are filtered from the blood and urine formation is initiated.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.