UBERON:0000204
From FANTOM5_SSTAR
| Name: | ventral part of telencephalon | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Dorsal part (base region) of the telencephalon." [GO:0021544, GO_REF:0000021, ISBN10:0471888893, PMID:12626695] | |
| Xrefs: |
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| Synonyms: |
"area ventralis telencephali" EXACT [ZFA:0000304] "subpallium" EXACT [GO:0021544, ZFA:0000304] "subpallium" NARROW [BTO:0003401] "ventral telencephalon" EXACT [ZFA:0000304] | |
| Comments: | AO notes: BTO term refers specifically to the avian structure | |
| Subset: | developmental_classification | |
| Created by: | cjm | |
| Creation date: | 2009-04-18T12:12:27Z |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002791(regional part of telencephalon) |
|---|---|
| part_of: | UBERON:0001893(telencephalon) |
Children
| part of: | UBERON:0002435 (striatum) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10152-102I8 (putamen, adult, donor10252)
- 10164-103B2 (caudate nucleus, adult, donor10252)
- 10176-103C5 (putamen, adult, donor10196)
- 10177-103C6 (caudate nucleus - adult, donor10196)
- 10354-105E3 (caudate nucleus, newborn, donor10223)
- 10365-105F5 (putamen, newborn, donor10223)
- 10372-105G3 (putamen, adult, donor10258)
- 11646-122D8 (Mouse Neurons - striatal, donor3)
- 11723-123D4 (Mouse Neurons - striatal, donor1)
... further results Mouse (Mus musculus)
- 10037-101F1 (nucleus accumbens, adult, pool1)
- 10152-102I8 (putamen, adult, donor10252)
- 10164-103B2 (caudate nucleus, adult, donor10252)
- 10176-103C5 (putamen, adult, donor10196)
- 10177-103C6 (caudate nucleus - adult, donor10196)
- 10354-105E3 (caudate nucleus, newborn, donor10223)
- 10365-105F5 (putamen, newborn, donor10223)
- 10372-105G3 (putamen, adult, donor10258)
- 11646-122D8 (Mouse Neurons - striatal, donor3)
- 11723-123D4 (Mouse Neurons - striatal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000204 (ventral part of telencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
