Personal tools

UBERON:0000412

From FANTOM5_SSTAR

Jump to: navigation, search

Name:dermal papilla
Namespace:FANTOM
Definition:"small, nipple-like extensions (or interdigitations) of the dermis into the epidermis. They can be observed at the surface of the skin in hands and feet as epidermal or papillary ridges (colloquially known as fingerprints). The dermal papillae nourishes all hair follicles and bring food and oxygen to the lower layers of epidermal cells. The pattern of ridges they produce in hands and feet are inherited features that are developed before birth. They remain unaltered (except size) throughout life, and are therefore used for fingerprints. The dermal papillae are part of the uppermost layer of the dermis, the papillary dermis, and the ridges they form greatly increase the surface area between the dermis and epidermis. Because the dermis' main function is to support the epidermis, this greatly increases the exchange of oxygen, nutrients, and waste products between these two layers. Additionally, the increase in surface area prevent the dermal and epidermal layers from separating from each others by strengthening the junction between them. With age, the papillae tend to flatten and sometimes increase in numbers. Dermal papillae also play a pivotal role in hair formation, growth and, cycling" [Wikipedia:Dermal_papillae]
Xrefs:
links:

BTO:0001858
FMA:70737
[1]
[2]
ncithesaurus:Dermal_Papilla

SCTID:320101005
Synonyms: "dermal papilla cell" RELATED [BTO:0001858]
"dermal papillae" EXACT PLURAL []
"DPC" RELATED [BTO:0001858]
"follicular papilla" EXACT [FMA:70737]
"hair follicle dermal papilla" RELATED [MP:0010687]
"papilla corii" RELATED [BTO:0001858]
"papilla dermatis" RELATED [BTO:0001858]
"papilla dermis" RELATED [BTO:0001858]
"papilla of corium" RELATED [BTO:0001858]
"papillae dermis" RELATED LATIN [Wikipedia:Dermal_papillae]
"skin papilla" RELATED [BTO:0001858]
Comments:Consider adding grouping class for TAO:0001995
Alt_id: UBERON:BTO_0001858-FMA_70737

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000479(tissue),UBERON:0004120(mesoderm-derived structure),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0001992(papillary layer of dermis)



Children

part of:CL:0000346 (hair follicle dermal papilla cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
  • 11348-117G7 (Hair Follicle Dermal Papilla Cells, donor2)
  • 11420-118F7 (Hair Follicle Dermal Papilla Cells, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000412 (dermal papilla), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.39e-66FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_33777ce6c65a9b8a45d7594f5535bb78p@chr7:127963997..127964004, -
2.39e-66FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_33777ce6c65a9b8a45d7594f5535bb78p@chr7:127963997..127964004, -
4.68e-66FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_d59496c3369508ae88a66a371fbc067dp@chr16:85617034..85617043, -
4.68e-66FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_d59496c3369508ae88a66a371fbc067dp@chr16:85617034..85617043, -
6.53e-66FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_e2c7473b92f5e66ceae86caf87a606afp@chr5:174252850..174252859, +
6.53e-66FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_e2c7473b92f5e66ceae86caf87a606afp@chr5:174252850..174252859, +
1.33e-60FFCP PHASE1:Hg19::chr20:940152..940156,-#_427f86e4b2f3a73fdc3852147eb6ff04p@chr20:940152..940156, -
1.33e-60FFCP PHASE2:Hg19::chr20:940152..940156,-#_427f86e4b2f3a73fdc3852147eb6ff04p@chr20:940152..940156, -
9.99e-60FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_4e61d756f509fa79cff23239990f6324p10@TBX15
9.99e-60FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_4e61d756f509fa79cff23239990f6324p10@TBX15
1.83e-59FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_449b9e538054955ad223a8377db23907p@chr17:73682761..73682766, +
1.83e-59FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_449b9e538054955ad223a8377db23907p@chr17:73682761..73682766, +
2.87e-53FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_65753f24e93759f07e1d25691bc475aep@chr12:5198401..5198415, +
2.87e-53FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_65753f24e93759f07e1d25691bc475aep@chr12:2163623..2163634, +
2.87e-53FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_65753f24e93759f07e1d25691bc475aep@chr12:5198401..5198415, +
2.87e-53FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_65753f24e93759f07e1d25691bc475aep@chr12:2163623..2163634, +
1.22e-44FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_3e209680cbfbc839913353e17282e1b9p@chr10:15760985..15760992, -
1.22e-44FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_3e209680cbfbc839913353e17282e1b9p@chr10:15760985..15760992, -
1.22e-44FFCP PHASE2:Hg19::chr16:85617044..85617059,-#_3e209680cbfbc839913353e17282e1b9p@chr16:85617044..85617059, -
1.22e-44FFCP PHASE1:Hg19::chr16:85617044..85617059,-#_3e209680cbfbc839913353e17282e1b9p@chr16:85617044..85617059, -
1.01e-38FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_e744253c96291611050f27c9a052ddf1p@chr15:39534820..39534834, +
1.01e-38FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_e744253c96291611050f27c9a052ddf1p@chr15:39534820..39534834, +
2.18e-38FFCP PHASE1:Hg19::chr3:147109858..147109861,+#_7627018795ddbb68f178b4a8e819118bp@chr3:147109858..147109861, +
2.18e-38FFCP PHASE2:Hg19::chr3:147109858..147109861,+#_7627018795ddbb68f178b4a8e819118bp@chr3:147109858..147109861, +
2.64e-38FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_6b5962688e49ba657339c17c202b847cp4@AB464362
2.64e-38FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_6b5962688e49ba657339c17c202b847cp4@AB464362
2.7e-38FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_e2d784df6ba5c9a0b83795feeb476a3ap@chr3:147112699..147112713, -
2.7e-38FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_e2d784df6ba5c9a0b83795feeb476a3ap@chr3:147112699..147112713, -
4.48e-38FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_965735719cad251f90802522bce8610fp@chr21:47405885..47405896, +
4.48e-38FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_965735719cad251f90802522bce8610fp@chr21:47405885..47405896, +
8.41e-38FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_520e2f312508993ef7e23c824b1f40a0p@chr15:80800274..80800278, -
8.41e-38FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_520e2f312508993ef7e23c824b1f40a0p@chr15:80800274..80800278, -
5.51e-34FFCP PHASE2:Hg19::chr17:38174999..38175001,+#_8caa0c17103343dccbb986c56e46af4cp8@CASC3
5.51e-34FFCP PHASE2:Hg19::chr2:235904638..235904641,-#_8caa0c17103343dccbb986c56e46af4cp@chr2:235904638..235904641, -
5.51e-34FFCP PHASE1:Hg19::chr2:235904638..235904641,-#_8caa0c17103343dccbb986c56e46af4cp@chr2:235904638..235904641, -
5.51e-34FFCP PHASE1:Hg19::chr17:38174999..38175001,+#_8caa0c17103343dccbb986c56e46af4cp8@CASC3
5.96e-34FFCP PHASE2:Hg19::chr10:90750010..90750015,+#_c862af633b92ca2975beb52cb8219d0ap15@FAS
5.96e-34FFCP PHASE1:Hg19::chr20:55403726..55403730,+#_c862af633b92ca2975beb52cb8219d0ap@chr20:55403726..55403730, +
5.96e-34FFCP PHASE2:Hg19::chr15:40773537..40773544,-#_c862af633b92ca2975beb52cb8219d0ap1@ENST00000489027
5.96e-34FFCP PHASE1:Hg19::chr13:114108115..114108122,-#_c862af633b92ca2975beb52cb8219d0ap13@ADPRHL1
5.96e-34FFCP PHASE2:Hg19::chr6:26305727..26305730,-#_c862af633b92ca2975beb52cb8219d0ap@chr6:26305727..26305730, -
5.96e-34FFCP PHASE1:Hg19::chr6:26305727..26305730,-#_c862af633b92ca2975beb52cb8219d0ap@chr6:26305727..26305730, -
5.96e-34FFCP PHASE1:Hg19::chr13:30075330..30075333,+#_c862af633b92ca2975beb52cb8219d0ap@chr13:30075330..30075333, +
5.96e-34FFCP PHASE2:Hg19::chr5:150398982..150399013,-#_c862af633b92ca2975beb52cb8219d0ap@chr5:150398982..150399013, -
5.96e-34FFCP PHASE1:Hg19::chr5:150398982..150399013,-#_c862af633b92ca2975beb52cb8219d0ap@chr5:150398982..150399013, -
5.96e-34FFCP PHASE2:Hg19::chr9:88939319..88939326,-#_c862af633b92ca2975beb52cb8219d0ap25@ZCCHC6
5.96e-34FFCP PHASE1:Hg19::chr6:168333065..168333071,+#_c862af633b92ca2975beb52cb8219d0ap33@MLLT4
5.96e-34FFCP PHASE1:Hg19::chr9:88939319..88939326,-#_c862af633b92ca2975beb52cb8219d0ap25@ZCCHC6
5.96e-34FFCP PHASE1:Hg19::chr12:69754026..69754035,+#_c862af633b92ca2975beb52cb8219d0ap@chr12:69754026..69754035, +
5.96e-34FFCP PHASE1:Hg19::chr15:40773537..40773544,-#_c862af633b92ca2975beb52cb8219d0ap1@ENST00000489027
5.96e-34FFCP PHASE1:Hg19::chr11:118789349..118789355,+#_c862af633b92ca2975beb52cb8219d0ap@chr11:118789349..118789355, +
5.96e-34FFCP PHASE1:Hg19::chr13:45914842..45914847,-#_c862af633b92ca2975beb52cb8219d0ap14@TPT1
5.96e-34FFCP PHASE2:Hg19::chr6:168333065..168333071,+#_c862af633b92ca2975beb52cb8219d0ap33@MLLT4
5.96e-34FFCP PHASE2:Hg19::chr7:93928562..93928567,+#_c862af633b92ca2975beb52cb8219d0ap@chr7:93928562..93928567, +
5.96e-34FFCP PHASE1:Hg19::chr7:93928562..93928567,+#_c862af633b92ca2975beb52cb8219d0ap@chr7:93928562..93928567, +
5.96e-34FFCP PHASE2:Hg19::chr13:50654430..50654438,+#_c862af633b92ca2975beb52cb8219d0ap@chr13:50654430..50654438, +
5.96e-34FFCP PHASE2:Hg19::chr11:118789349..118789355,+#_c862af633b92ca2975beb52cb8219d0ap@chr11:118789349..118789355, +
5.96e-34FFCP PHASE1:Hg19::chr3:124485247..124485272,-#_c862af633b92ca2975beb52cb8219d0ap@chr3:124485247..124485272, -
5.96e-34FFCP PHASE2:Hg19::chr9:35748867..35748868,-#_c862af633b92ca2975beb52cb8219d0ap13@GBA2
5.96e-34FFCP PHASE2:Hg19::chr13:114108115..114108122,-#_c862af633b92ca2975beb52cb8219d0ap13@ADPRHL1
5.96e-34FFCP PHASE1:Hg19::chr9:35748867..35748868,-#_c862af633b92ca2975beb52cb8219d0ap13@GBA2
5.96e-34FFCP PHASE1:Hg19::chr11:6341147..6341156,-#_c862af633b92ca2975beb52cb8219d0ap14@PRKCDBP
5.96e-34FFCP PHASE2:Hg19::chr3:124485247..124485272,-#_c862af633b92ca2975beb52cb8219d0ap@chr3:124485247..124485272, -
5.96e-34FFCP PHASE1:Hg19::chr13:50654430..50654438,+#_c862af633b92ca2975beb52cb8219d0ap@chr13:50654430..50654438, +
5.96e-34FFCP PHASE2:Hg19::chr2:30864461..30864472,+#_c862af633b92ca2975beb52cb8219d0ap11@LCLAT1
5.96e-34FFCP PHASE2:Hg19::chr13:30075330..30075333,+#_c862af633b92ca2975beb52cb8219d0ap@chr13:30075330..30075333, +
5.96e-34FFCP PHASE1:Hg19::chr10:90750010..90750015,+#_c862af633b92ca2975beb52cb8219d0ap15@FAS
5.96e-34FFCP PHASE1:Hg19::chr2:30864461..30864472,+#_c862af633b92ca2975beb52cb8219d0ap11@LCLAT1
5.96e-34FFCP PHASE2:Hg19::chr12:69754026..69754035,+#_c862af633b92ca2975beb52cb8219d0ap@chr12:69754026..69754035, +
5.96e-34FFCP PHASE2:Hg19::chr4:151246994..151247003,-#_c862af633b92ca2975beb52cb8219d0ap@chr4:151246994..151247003, -
5.96e-34FFCP PHASE1:Hg19::chr5:53358788..53358795,-#_c862af633b92ca2975beb52cb8219d0ap@chr5:53358788..53358795, -
5.96e-34FFCP PHASE1:Hg19::chr8:23210765..23210805,+#_c862af633b92ca2975beb52cb8219d0ap@chr8:23210765..23210805, +
5.96e-34FFCP PHASE1:Hg19::chr4:151246994..151247003,-#_c862af633b92ca2975beb52cb8219d0ap@chr4:151246994..151247003, -
5.96e-34FFCP PHASE2:Hg19::chr13:45914842..45914847,-#_c862af633b92ca2975beb52cb8219d0ap14@TPT1
5.96e-34FFCP PHASE2:Hg19::chr11:6341147..6341156,-#_c862af633b92ca2975beb52cb8219d0ap14@PRKCDBP
5.96e-34FFCP PHASE2:Hg19::chr5:53358788..53358795,-#_c862af633b92ca2975beb52cb8219d0ap@chr5:53358788..53358795, -
5.96e-34FFCP PHASE2:Hg19::chr9:3330877..3330914,-#_c862af633b92ca2975beb52cb8219d0ap@chr9:3330877..3330914, -
5.96e-34FFCP PHASE2:Hg19::chr8:23210765..23210805,+#_c862af633b92ca2975beb52cb8219d0ap@chr8:23210765..23210805, +
5.96e-34FFCP PHASE1:Hg19::chr9:3330877..3330914,-#_c862af633b92ca2975beb52cb8219d0ap@chr9:3330877..3330914, -
5.96e-34FFCP PHASE2:Hg19::chr20:55403726..55403730,+#_c862af633b92ca2975beb52cb8219d0ap@chr20:55403726..55403730, +
6.51e-34FFCP PHASE1:Hg19::chr15:90344831..90344839,-#_e9d9a458a565d2b27f8796cb5ccfdc8bp@chr15:90344831..90344839, -
6.51e-34FFCP PHASE2:Hg19::chr15:90344831..90344839,-#_e9d9a458a565d2b27f8796cb5ccfdc8bp@chr15:90344831..90344839, -
7.56e-34FFCP PHASE1:Hg19::chr3:147114993..147115013,-#_47ce8aeaa4b9ff84fa2fa4930d28a873p5@ZIC4
7.56e-34FFCP PHASE2:Hg19::chr3:147114993..147115013,-#_47ce8aeaa4b9ff84fa2fa4930d28a873p5@ZIC4
7.56e-34FFCP PHASE2:Hg19::chr7:1705417..1705429,+#_47ce8aeaa4b9ff84fa2fa4930d28a873p@chr7:1705417..1705429, +
7.56e-34FFCP PHASE1:Hg19::chr7:1705417..1705429,+#_47ce8aeaa4b9ff84fa2fa4930d28a873p@chr7:1705417..1705429, +
7.7e-34FFCP PHASE1:Hg19::chr3:147128031..147128038,+#_fcc4ffd6451d25f003688a629566b218p7@AB464362
7.7e-34FFCP PHASE2:Hg19::chr3:147128031..147128038,+#_fcc4ffd6451d25f003688a629566b218p7@AB464362
8.46e-34FFCP PHASE2:Hg19::chr3:134046037..134046050,+#_16101891db18db3b1d3c3e478431d50bp@chr3:134046037..134046050, +
8.46e-34FFCP PHASE1:Hg19::chr3:134046037..134046050,+#_16101891db18db3b1d3c3e478431d50bp@chr3:134046037..134046050, +
9.1e-34FFCP PHASE2:Hg19::chr17:17418548..17418557,-#_f8d7532929f760a6cc73cd7df1b018cap@chr17:17418548..17418557, -
9.1e-34FFCP PHASE2:Hg19::chr15:33018927..33018930,+#_f8d7532929f760a6cc73cd7df1b018cap@chr15:33018927..33018930, +
9.1e-34FFCP PHASE1:Hg19::chr17:17418548..17418557,-#_f8d7532929f760a6cc73cd7df1b018cap@chr17:17418548..17418557, -
9.1e-34FFCP PHASE1:Hg19::chr15:33018927..33018930,+#_f8d7532929f760a6cc73cd7df1b018cap@chr15:33018927..33018930, +
1.32e-33FFCP PHASE2:Hg19::chr7:140341251..140341265,-#_968ba7bc93a3ef7c61bc3cdcad3d1bb3p3@DENND2A
1.32e-33FFCP PHASE1:Hg19::chr7:140341251..140341265,-#_968ba7bc93a3ef7c61bc3cdcad3d1bb3p3@DENND2A
2.07e-33FFCP PHASE2:Hg19::chr4:107237244..107237257,+#_b5cf248f808722c7aa5a40dfccb83522p8@AIMP1
2.07e-33FFCP PHASE1:Hg19::chr4:107237244..107237257,+#_b5cf248f808722c7aa5a40dfccb83522p8@AIMP1
4.17e-30FFCP PHASE2:Hg19::chr19:15442274..15442284,+#_27683966691414570da9995bab4c6972p@chr19:15442274..15442284, +
4.17e-30FFCP PHASE1:Hg19::chr19:15442274..15442284,+#_27683966691414570da9995bab4c6972p@chr19:15442274..15442284, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0000412&oldid=3277108"