UBERON:0001173
From FANTOM5_SSTAR
| Name: | biliary tree | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Hollow tree organ, the organ parts of which consists of the bile ducts[FMA]." [FMA:14665, Wikipedia:Biliary_tract] | ||
| Xrefs: |
| ||
| Synonyms: | "biliary tract" EXACT [] | ||
| Alt_id: | UBERON:FMA_14665-XAO_0000455 | ||
| Subset: |
organ_slim uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004119(endoderm-derived structure),UBERON:0013765(digestive system element) |
|---|---|
| develops_from: | UBERON:0004912(biliary bud) |
| part_of: | UBERON:0002294(biliary system) |
Children
| part of: | UBERON:0001174 (common bile duct),UBERON:0002110 (gallbladder),UBERON:0002394 (bile duct),UBERON:0005171 (hepatic duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10198-103E9 (gall bladder, adult)
- 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10432-106D9 (bile duct carcinoma cell line:HuCCT1)
- 10470-106I2 (gall bladder carcinoma cell line:TGBC14TKB)
- 10496-107C1 (bile duct carcinoma cell line:TFK-1)
- 10533-107G2
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10627-108H6
- 10629-108H8
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001173 (biliary tree), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:35096519..35096524, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr16:28911901..28911906, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:85585949..85585969, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr12:100752983..100752984, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr4:126939557..126939562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr5:114422970..114422985, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr5:124112234..124112240, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:60279719..60279737, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr13:96429602..96429605, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:54785454..54785456, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr4:137487112..137487117, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr6:129180613..129180616, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr8:25530071..25530072, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:93499468..93499494, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr8:25530071..25530072, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr2:84756280..84756286, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr15:88669906..88669914, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr8:114250006..114250039, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr1:186559285..186559288, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr10:85585949..85585969, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_5703c93ecdfe5914d53ea23a4cc8b84c | p@chr11:115280630..115280662, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Hollow tree organ, the organ parts of which consist of the bile ducts.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
