Personal tools

UBERON:0001468

From FANTOM5_SSTAR

Jump to: navigation, search

Name:intervertebral joint
Namespace:FANTOM
Definition:"The joint between adjacent vertebral bodies. May be composed of the nucleus pulposus, annular ligament, and the anterior and posterior longitudinal ligaments." [http://www.medilexicon.com/medicaldictionary.php?t
Xrefs:
links:

FMA:25511
MA:0001514
ncithesaurus:Vertebral_Joint

SCTID:244512000
Synonyms: "inter-centrum joint" EXACT []
"inter-vertebral joint" EXACT []
"intervertebral symphysis" EXACT [FMA:25511]
"joint of vertebral body" EXACT [FMA:25511]
"vertebral joint" BROAD []
Comments:AO notes: FMA has 'intervertebral joint' as a GAT, and has two distinct classes 'intervertebral symphysis' and 'intervertebral syndesmosis', but note that the latter do not connect the centra
Alt_id: UBERON:FMA_25511-MA_0001514

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002216(symphysis),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0001130(vertebral column)



Children

part of:UBERON:0011135 (intervertebral cartilage)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001468 (intervertebral joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.25e-162FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_49dfcab96b2b7ea5c106be8dd7f74b58p@chr3:174737010..174737023, +
1.25e-162FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_49dfcab96b2b7ea5c106be8dd7f74b58p@chr3:174737010..174737023, +
3.92e-140FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_c121b8d54ec08227b926f0b37b285079p4@PAX1
3.92e-140FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_c121b8d54ec08227b926f0b37b285079p4@PAX1
4.22e-99FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_b752e559a3bc5902b8f0ff190df08d8fp@chr5:30104176..30104187, -
4.22e-99FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_b752e559a3bc5902b8f0ff190df08d8fp@chr5:30104176..30104187, -
1.06e-78FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_d3b6a2c1270a696d815d5f264032614ep4@NKX3-2
1.06e-78FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_d3b6a2c1270a696d815d5f264032614ep4@NKX3-2
2.52e-71FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_e9580448b413ecf7b255af1447f6c538p@chr9:114135497..114135526, -
2.52e-71FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_e9580448b413ecf7b255af1447f6c538p@chr9:114135497..114135526, -
7.4e-71FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_993086174b364ae646d4a0096fe0b2a2p@chr2:241897125..241897142, -
7.4e-71FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_993086174b364ae646d4a0096fe0b2a2p@chr2:241897125..241897142, -
6.33e-70FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_75a325ba37e9a65391a06b77586fac81p@chr3:80727046..80727051, -
6.33e-70FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_75a325ba37e9a65391a06b77586fac81p@chr3:80727046..80727051, -
4.8e-67FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_73ccab6d64c9e4cfdfeea74900e14cedp15@SNED1
4.8e-67FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_73ccab6d64c9e4cfdfeea74900e14cedp15@SNED1
1.24e-66FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_5bb8b731dd5360e402db74ce4db6df04p20@CAPZB
1.24e-66FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_5bb8b731dd5360e402db74ce4db6df04p20@CAPZB
1.26e-62FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_08ef1ee6d023d18f3b259332c0d69701p@chr1:19778678..19778689, -
1.26e-62FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_08ef1ee6d023d18f3b259332c0d69701p@chr1:19778678..19778689, -
1.1e-59FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_04cd10e7b1017a0d6a171ff5ead83ebbp@chr2:241897189..241897221, -
1.1e-59FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_04cd10e7b1017a0d6a171ff5ead83ebbp@chr2:241897189..241897221, -
1.55e-57FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_af14cdb57884894d64829f84f0f8a6c7p1@uc010aki.1
1.55e-57FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_af14cdb57884894d64829f84f0f8a6c7p1@uc010aki.1
4.09e-56FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_0b9ddc637ebedaf82ed73975df180466p6@SIX4
4.09e-56FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_0b9ddc637ebedaf82ed73975df180466p6@SIX4
3.74e-53FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_6590f4fdd6c9d129c4be9bc0dbaa8dd2p3@uc010aki.1
3.74e-53FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_6590f4fdd6c9d129c4be9bc0dbaa8dd2p3@uc010aki.1
1.15e-51FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_be2087aeb7e87fd59a8b1b7f514302a9p3@PAX1
1.15e-51FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_be2087aeb7e87fd59a8b1b7f514302a9p3@PAX1
2.3e-51FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_54f26fd98bca5c0918119f3dd3b99a99p@chr10:81923378..81923389, -
2.3e-51FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_54f26fd98bca5c0918119f3dd3b99a99p@chr10:81923378..81923389, -
3.24e-51FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_314b1a5a72c61a6814b7fbe41e3091bap@chr2:12248310..12248334, -
3.24e-51FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_314b1a5a72c61a6814b7fbe41e3091bap@chr2:12248310..12248334, -
8.0e-51FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_10a22045d89dbaa3552b632d160b2120p19@HDAC9
8.0e-51FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_10a22045d89dbaa3552b632d160b2120p19@HDAC9
5.06e-49FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_1bd06ce9fa924006d7a4e7bc84606005p@chr7:158224707..158224729, -
5.06e-49FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_1bd06ce9fa924006d7a4e7bc84606005p@chr7:158224707..158224729, -
5.24e-48FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_fc347ac81feaec39c80804382248900ap@chr1:65888177..65888194, +
5.24e-48FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_fc347ac81feaec39c80804382248900ap@chr1:65888177..65888194, +
2.98e-45FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_deecb612de712f1c45ace9f8ce8fb1d3p3@NKX3-2
2.98e-45FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_deecb612de712f1c45ace9f8ce8fb1d3p3@NKX3-2
2.92e-44FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_b524bbf896b92e0d64288e2897568e84p1@MGC27382
2.92e-44FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_b524bbf896b92e0d64288e2897568e84p1@MGC27382
1.71e-43FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_8043595012ecdce23c0b8da75aa1d1aap18@HDAC9
1.71e-43FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_8043595012ecdce23c0b8da75aa1d1aap18@HDAC9
1.48e-40FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_c8d1ef7475037d58937138b0c94d6323p@chr13:24914614..24914622, -
1.48e-40FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_c8d1ef7475037d58937138b0c94d6323p@chr9:33028063..33028067, -
1.48e-40FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_c8d1ef7475037d58937138b0c94d6323p@chr9:33028063..33028067, -
1.48e-40FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_c8d1ef7475037d58937138b0c94d6323p@chr13:24914614..24914622, -
1.64e-40FFCP PHASE1:Hg19::chr20:21686317..21686350,+#_9dc0863c9b715fdb0b9e35c66b9f8957p1@PAX1
1.64e-40FFCP PHASE2:Hg19::chr20:21686317..21686350,+#_9dc0863c9b715fdb0b9e35c66b9f8957p1@PAX1
1.81e-40FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_7d3ab1f5eb1be07c99c66fbc51e2d6c3p5@PTGFR
1.81e-40FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_7d3ab1f5eb1be07c99c66fbc51e2d6c3p5@PTGFR
2.13e-40FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_77cec2907e768e4edbf105d2a1ea2b78p@chr2:241897363..241897398, +
2.13e-40FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_77cec2907e768e4edbf105d2a1ea2b78p@chr2:241897363..241897398, +
3.04e-39FFCP PHASE1:Hg19::chr20:21686290..21686311,+#_e2ba82a133381e4787cf71d0ee014c25p2@PAX1
3.04e-39FFCP PHASE2:Hg19::chr20:21686290..21686311,+#_e2ba82a133381e4787cf71d0ee014c25p2@PAX1
7.19e-39FFCP PHASE1:Hg19::chr7:18832759..18832786,+#_bf424eaae208ad3040adf7e2f9e1390ap16@HDAC9
7.19e-39FFCP PHASE2:Hg19::chr7:18832759..18832786,+#_bf424eaae208ad3040adf7e2f9e1390ap16@HDAC9
7.19e-39FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_bf424eaae208ad3040adf7e2f9e1390ap@chr5:140887761..140887777, +
7.19e-39FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_bf424eaae208ad3040adf7e2f9e1390ap@chr5:140887761..140887777, +
1.24e-38FFCP PHASE2:Hg19::chr4:77068930..77068959,-#_9ad5a0564f2e44a293062d981cd1a908p4@NUP54
1.24e-38FFCP PHASE1:Hg19::chr4:77068930..77068959,-#_9ad5a0564f2e44a293062d981cd1a908p4@NUP54
2.08e-38FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_5cba1f32d1795161046c9bbd2c44c224p@chr2:241938405..241938416, +
2.08e-38FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_5cba1f32d1795161046c9bbd2c44c224p@chr2:241938405..241938416, +
3.34e-38FFCP PHASE2:Hg19::chr4:13546632..13546662,-#_12b9d126e67c4b8226ae2c586f8c7b03p1@NKX3-2
3.34e-38FFCP PHASE1:Hg19::chr4:13546632..13546662,-#_12b9d126e67c4b8226ae2c586f8c7b03p1@NKX3-2
3.68e-38FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_a966b2b82a429d58989ec9e8bf25e2d4p10@SYNJ2
3.68e-38FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_a966b2b82a429d58989ec9e8bf25e2d4p10@SYNJ2
5.39e-38FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_729e80033e87fa148ffc8f1197bbc990p@chr9:16138889..16138902, -
5.39e-38FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_729e80033e87fa148ffc8f1197bbc990p@chr9:16138889..16138902, -
8.66e-38FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_44c8a6fcb087b93c28352f79b3b20053p2@ENST00000518706
8.66e-38FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_44c8a6fcb087b93c28352f79b3b20053p2@ENST00000518706
2.96e-37FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_d9bf157a789364ba55ef390bc64c8fd9p1@ENST00000436845
2.96e-37FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_d9bf157a789364ba55ef390bc64c8fd9p1@ENST00000436845
6.92e-37FFCP PHASE2:Hg19::chr9:123239747..123239765,-#_5fe64446d18b2671fd194e7a71c3ffa7p12@CDK5RAP2
6.92e-37FFCP PHASE1:Hg19::chr9:123239747..123239765,-#_5fe64446d18b2671fd194e7a71c3ffa7p12@CDK5RAP2
3.28e-36FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_702cd8d21ff599d485e8dc9ebe8043cdp1@ENST00000413519
3.28e-36FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_702cd8d21ff599d485e8dc9ebe8043cdp1@ENST00000413519
9.62e-35FFCP PHASE2:Hg19::chr14:37126814..37126834,+#_b31b60c3a0d1c46b3ad35762a013f11cp4@PAX9
9.62e-35FFCP PHASE1:Hg19::chr14:37126814..37126834,+#_b31b60c3a0d1c46b3ad35762a013f11cp4@PAX9
1.8e-34FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_083add6575f77189a5bac9ca00adf141p@chr7:100202784..100202796, -
1.8e-34FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_083add6575f77189a5bac9ca00adf141p@chr7:100202784..100202796, -
3.69e-34FFCP PHASE1:Hg19::chr12:54422268..54422278,+#_eedd06ebbe788ca2e93c10c4c7e12107p8@HOXC6
3.69e-34FFCP PHASE2:Hg19::chr12:54422268..54422278,+#_eedd06ebbe788ca2e93c10c4c7e12107p8@HOXC6
5.52e-34FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_69839067a386c1158f2277a1cd994413p6@CCDC86
5.52e-34FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_69839067a386c1158f2277a1cd994413p6@CCDC86
1.43e-33FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_445fb9e578d15817ea9677f46d763b4ap@chr20:21695435..21695452, +
1.43e-33FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_445fb9e578d15817ea9677f46d763b4ap@chr20:21695435..21695452, +
5.36e-33FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_64029d51a228c17a568fd3c93bc2a2cbp@chr16:70795228..70795237, +
5.36e-33FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_64029d51a228c17a568fd3c93bc2a2cbp@chr16:70795228..70795237, +
1.05e-32FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_8deba1acbb224ffdd92526a69dea5645p@chr3:158384350..158384362, -
1.05e-32FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_8deba1acbb224ffdd92526a69dea5645p@chr3:158384350..158384362, -
1.7e-32FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_5e19db0e46a23229cdfc8e613114c7f3p9@CYTIP
1.7e-32FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_5e19db0e46a23229cdfc8e613114c7f3p9@CYTIP
2.34e-32FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_11592a7bba411e354dfee69a03bbe9c0p@chr18:12012068..12012098, +
2.34e-32FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_11592a7bba411e354dfee69a03bbe9c0p@chr18:12012068..12012098, +
2.79e-31FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_2abfcf85f4597859f4b5344ec6771390p1@ENST00000555639
2.79e-31FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_2abfcf85f4597859f4b5344ec6771390p1@ENST00000555639

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001468&oldid=3277244"