UBERON:0001758
From FANTOM5_SSTAR
Name: | periodontium | |
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Namespace: | FANTOM | |
Definition: | "The tissues that invest or help to invest and support the teeth, including the periodontal ligament, gingivae, cementum, and alveolar and supporting bone[BTO]." [BTO:0001021, Wikipedia:Periodontium] | |
Xrefs: |
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Synonyms: |
"paradentium" RELATED [MESH:A.14.254.646] "periodontal ligament" RELATED INCONSISTENT [FMA:56665] "periodontal membrane" RELATED [MA:0002467] "tooth supporting structure" RELATED [MESH:A.14.254.646] | |
Comments: | note FMA treats periodontium and periodontal ligament as the same | |
Alt_id: | UBERON:FMA_56665-MA_0002467 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000479(tissue) |
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part_of: | UBERON:0003672(dentition) |
Children
part of: | CL:0002556 (fibroblast of periodontium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001758 (periodontium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data