UBERON:0001768
From FANTOM5_SSTAR
Name: | uvea | |
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Namespace: | FANTOM | |
Definition: | "pigmented middle of the three concentric layers that make up an eye[WP]. The pigmented vascular coat of the eyeball, consisting of the CHOROID; CILIARY BODY; and IRIS, which are continuous with each other. (Cline et al., Dictionary of Visual Science, 4th ed)[GAID]." [Wikipedia:Uvea] | |
Xrefs: |
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Synonyms: |
"tunica vasculosa bulbi" RELATED LATIN [Wikipedia:Uvea] "tunica vasculosa of eyeball" EXACT [] "uvea" EXACT [] "uveal tract" EXACT [] | |
Comments: | TODO - check child terms, isa vs partof | |
Alt_id: | UBERON:FMA_58103-MA_0002480 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002203(vasculature of eye) |
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part_of: | UBERON:0001801(anterior segment of eyeball) |
Children
part of: | UBERON:0003956 (aqueous drainage system),UBERON:0011892 (anterior uvea) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11532-120A2 (Trabecular Meshwork Cells, donor1)
- 11610-120I8
- 11612-122A1 (Trabecular Meshwork Cells, donor2)
- 11691-122I8
- 11693-123A1 (Trabecular Meshwork Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001768 (uvea), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data