UBERON:0001785
From FANTOM5_SSTAR
Name: | cranial nerve | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "Cranial nerves are nerves that emerge directly from the brain, in contrast to spinal nerves, which emerge from segments of the spinal cord. In humans, there are traditionally twelve pairs of cranial nerves. Only the first and the second pair emerge from the cerebrum; the remaining ten pairs emerge from the brainstem[WP]." [Wikipedia:Cranial_nerve] | ||
Xrefs: |
| ||
Synonyms: |
"cranial nerves" RELATED [] "cranial neural tree organ" EXACT [] "nervus cranialis" RELATED LATIN [Wikipedia:Cranial_nerve] | ||
Comments: | Editors note: not classified as a nerve in FMA. Note the structure of EMAPA is rather odd here - EMAPA:17264 (nerve of CNS) has a single child, cranial. We make EMAPA:17264 a subclass of this structure, as this appears to be the intent | ||
Alt_id: | UBERON:FMA_5865-MA_0000215-XAO_0003089-ZFA_0000641 | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0001021(nerve),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0015212(lateral structure) |
---|
Children
is a: | UBERON:0000941 (cranial nerve II) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10277-104E7 (optic nerve, donor1)
- 10305-104H8
- 10333-105B9
- 11959-126C6 (Neurons - spiral ganglion, pool1)
Mouse (Mus musculus)
- 10277-104E7 (optic nerve, donor1)
- 10305-104H8
- 10333-105B9
- 11959-126C6 (Neurons - spiral ganglion, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001785 (cranial nerve), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE2:Hg19::chr12:57628762..57628773,-#_6d601da4095f861eeab604ba2180eb3b | p@chr12:57628762..57628773, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:57628762..57628773,-#_6d601da4095f861eeab604ba2180eb3b | p@chr12:57628762..57628773, - |
9.37e-99 | FFCP PHASE2:Hg19::chr14:105807545..105807554,+#_1a5f33708bc0b969452086a20bc855da | p@chr14:105807545..105807554, + |
9.37e-99 | FFCP PHASE1:Hg19::chr2:60133192..60133194,-#_1a5f33708bc0b969452086a20bc855da | p@chr2:60133192..60133194, - |
9.37e-99 | FFCP PHASE2:Hg19::chr2:60133192..60133194,-#_1a5f33708bc0b969452086a20bc855da | p@chr2:60133192..60133194, - |
9.37e-99 | FFCP PHASE2:Hg19::chr18:25161980..25161984,-#_1a5f33708bc0b969452086a20bc855da | p@chr18:25161980..25161984, - |
9.37e-99 | FFCP PHASE1:Hg19::chr4:127394496..127394500,-#_1a5f33708bc0b969452086a20bc855da | p@chr4:127394496..127394500, - |
9.37e-99 | FFCP PHASE2:Hg19::chr4:127394496..127394500,-#_1a5f33708bc0b969452086a20bc855da | p@chr4:127394496..127394500, - |
9.37e-99 | FFCP PHASE1:Hg19::chr14:105807545..105807554,+#_1a5f33708bc0b969452086a20bc855da | p@chr14:105807545..105807554, + |
9.37e-99 | FFCP PHASE1:Hg19::chr18:25161980..25161984,-#_1a5f33708bc0b969452086a20bc855da | p@chr18:25161980..25161984, - |
9.37e-99 | FFCP PHASE1:Hg19::chr5:151258901..151258902,+#_1a5f33708bc0b969452086a20bc855da | p@chr5:151258901..151258902, + |
9.37e-99 | FFCP PHASE1:Hg19::chr1:62928606..62928608,+#_1a5f33708bc0b969452086a20bc855da | p@chr1:62928606..62928608, + |
9.37e-99 | FFCP PHASE2:Hg19::chr5:151258901..151258902,+#_1a5f33708bc0b969452086a20bc855da | p@chr5:151258901..151258902, + |
9.37e-99 | FFCP PHASE2:Hg19::chr18:74702556..74702558,-#_1a5f33708bc0b969452086a20bc855da | p@chr18:74702556..74702558, - |
9.37e-99 | FFCP PHASE1:Hg19::chr5:149250331..149250335,-#_1a5f33708bc0b969452086a20bc855da | p@chr5:149250331..149250335, - |
9.37e-99 | FFCP PHASE2:Hg19::chr1:62928606..62928608,+#_1a5f33708bc0b969452086a20bc855da | p@chr1:62928606..62928608, + |
9.37e-99 | FFCP PHASE2:Hg19::chr5:149250331..149250335,-#_1a5f33708bc0b969452086a20bc855da | p@chr5:149250331..149250335, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:188432107..188432111,+#_1a5f33708bc0b969452086a20bc855da | p@chr2:188432107..188432111, + |
9.37e-99 | FFCP PHASE2:Hg19::chr2:188432107..188432111,+#_1a5f33708bc0b969452086a20bc855da | p@chr2:188432107..188432111, + |
9.37e-99 | FFCP PHASE1:Hg19::chr7:15056365..15056368,-#_1a5f33708bc0b969452086a20bc855da | p@chr7:15056365..15056368, - |
9.37e-99 | FFCP PHASE1:Hg19::chr18:74702556..74702558,-#_1a5f33708bc0b969452086a20bc855da | p@chr18:74702556..74702558, - |
9.37e-99 | FFCP PHASE2:Hg19::chr7:15056365..15056368,-#_1a5f33708bc0b969452086a20bc855da | p@chr7:15056365..15056368, - |
2.55e-98 | FFCP PHASE1:Hg19::chr2:29645795..29645797,+#_57fed55761a10e5c25e283baa5099efe | p@chr2:29645795..29645797, + |
2.55e-98 | FFCP PHASE2:Hg19::chr16:66170755..66170759,-#_57fed55761a10e5c25e283baa5099efe | p@chr16:66170755..66170759, - |
2.55e-98 | FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_57fed55761a10e5c25e283baa5099efe | p41@NAV3 |
2.55e-98 | FFCP PHASE1:Hg19::chr10:37679189..37679193,+#_57fed55761a10e5c25e283baa5099efe | p@chr10:37679189..37679193, + |
2.55e-98 | FFCP PHASE1:Hg19::chr18:45498690..45498695,-#_57fed55761a10e5c25e283baa5099efe | p@chr18:45498690..45498695, - |
2.55e-98 | FFCP PHASE1:Hg19::chr12:127992016..127992052,+#_57fed55761a10e5c25e283baa5099efe | p@chr12:127992016..127992052, + |
2.55e-98 | FFCP PHASE1:Hg19::chr2:21277180..21277193,+#_57fed55761a10e5c25e283baa5099efe | p@chr2:21277180..21277193, + |
2.55e-98 | FFCP PHASE1:Hg19::chr7:73444812..73444816,+#_57fed55761a10e5c25e283baa5099efe | p@chr7:73444812..73444816, + |
2.55e-98 | FFCP PHASE2:Hg19::chr7:73444812..73444816,+#_57fed55761a10e5c25e283baa5099efe | p@chr7:73444812..73444816, + |
2.55e-98 | FFCP PHASE2:Hg19::chr3:27750995..27750997,-#_57fed55761a10e5c25e283baa5099efe | p@chr3:27750995..27750997, - |
2.55e-98 | FFCP PHASE2:Hg19::chr2:29645795..29645797,+#_57fed55761a10e5c25e283baa5099efe | p@chr2:29645795..29645797, + |
2.55e-98 | FFCP PHASE1:Hg19::chr12:68567714..68567717,+#_57fed55761a10e5c25e283baa5099efe | p@chr12:68567714..68567717, + |
2.55e-98 | FFCP PHASE1:Hg19::chr1:203036812..203036840,+#_57fed55761a10e5c25e283baa5099efe | p@chr1:203036812..203036840, + |
2.55e-98 | FFCP PHASE1:Hg19::chr2:171939999..171940009,-#_57fed55761a10e5c25e283baa5099efe | p@chr2:171939999..171940009, - |
2.55e-98 | FFCP PHASE2:Hg19::chr2:21277180..21277193,+#_57fed55761a10e5c25e283baa5099efe | p@chr2:21277180..21277193, + |
2.55e-98 | FFCP PHASE2:Hg19::chr2:192696669..192696673,+#_57fed55761a10e5c25e283baa5099efe | p@chr2:192696669..192696673, + |
2.55e-98 | FFCP PHASE2:Hg19::chr1:203036812..203036840,+#_57fed55761a10e5c25e283baa5099efe | p@chr1:203036812..203036840, + |
2.55e-98 | FFCP PHASE1:Hg19::chr1:169073323..169073334,+#_57fed55761a10e5c25e283baa5099efe | p4@ENST00000415637 |
2.55e-98 | FFCP PHASE2:Hg19::chr2:171939999..171940009,-#_57fed55761a10e5c25e283baa5099efe | p@chr2:171939999..171940009, - |
2.55e-98 | FFCP PHASE1:Hg19::chr16:89970522..89970530,+#_57fed55761a10e5c25e283baa5099efe | p9@TCF25 |
2.55e-98 | FFCP PHASE2:Hg19::chrX:131884370..131884375,-#_57fed55761a10e5c25e283baa5099efe | p@chrX:131884370..131884375, - |
2.55e-98 | FFCP PHASE1:Hg19::chrX:25873187..25873209,+#_57fed55761a10e5c25e283baa5099efe | p@chrX:25873187..25873209, + |
2.55e-98 | FFCP PHASE2:Hg19::chr10:37679189..37679193,+#_57fed55761a10e5c25e283baa5099efe | p@chr10:37679189..37679193, + |
2.55e-98 | FFCP PHASE1:Hg19::chr8:130597061..130597068,+#_57fed55761a10e5c25e283baa5099efe | p@chr8:130597061..130597068, + |
2.55e-98 | FFCP PHASE1:Hg19::chr14:106176908..106176916,-#_57fed55761a10e5c25e283baa5099efe | p3@BC098451 |
2.55e-98 | FFCP PHASE2:Hg19::chr1:169073323..169073334,+#_57fed55761a10e5c25e283baa5099efe | p4@ENST00000415637 |
2.55e-98 | FFCP PHASE1:Hg19::chr18:61506836..61506840,+#_57fed55761a10e5c25e283baa5099efe | p@chr18:61506836..61506840, + |
2.55e-98 | FFCP PHASE1:Hg19::chr5:126962527..126962529,-#_57fed55761a10e5c25e283baa5099efe | p@chr5:126962527..126962529, - |
2.55e-98 | FFCP PHASE1:Hg19::chr6:16317123..16317126,+#_57fed55761a10e5c25e283baa5099efe | p@chr6:16317123..16317126, + |
2.55e-98 | FFCP PHASE2:Hg19::chr17:47107522..47107524,+#_57fed55761a10e5c25e283baa5099efe | p@chr17:47107522..47107524, + |
2.55e-98 | FFCP PHASE1:Hg19::chr3:13992334..13992338,-#_57fed55761a10e5c25e283baa5099efe | p@chr3:13992334..13992338, - |
2.55e-98 | FFCP PHASE1:Hg19::chr11:2435409..2435443,-#_57fed55761a10e5c25e283baa5099efe | p@chr11:2435409..2435443, - |
2.55e-98 | FFCP PHASE1:Hg19::chr16:55740953..55740956,+#_57fed55761a10e5c25e283baa5099efe | p@chr16:55740953..55740956, + |
2.55e-98 | FFCP PHASE2:Hg19::chr5:126962527..126962529,-#_57fed55761a10e5c25e283baa5099efe | p@chr5:126962527..126962529, - |
2.55e-98 | FFCP PHASE1:Hg19::chr16:19586229..19586233,+#_57fed55761a10e5c25e283baa5099efe | p12@C16orf62 |
2.55e-98 | FFCP PHASE2:Hg19::chr13:64423563..64423566,+#_57fed55761a10e5c25e283baa5099efe | p@chr13:64423563..64423566, + |
2.55e-98 | FFCP PHASE2:Hg19::chr6:16317123..16317126,+#_57fed55761a10e5c25e283baa5099efe | p@chr6:16317123..16317126, + |
2.55e-98 | FFCP PHASE1:Hg19::chr5:58471631..58471634,+#_57fed55761a10e5c25e283baa5099efe | p@chr5:58471631..58471634, + |
2.55e-98 | FFCP PHASE2:Hg19::chr3:13992334..13992338,-#_57fed55761a10e5c25e283baa5099efe | p@chr3:13992334..13992338, - |
2.55e-98 | FFCP PHASE1:Hg19::chr1:1361494..1361497,+#_57fed55761a10e5c25e283baa5099efe | p7@TMEM88B |
2.55e-98 | FFCP PHASE1:Hg19::chr14:78718132..78718157,+#_57fed55761a10e5c25e283baa5099efe | p@chr14:78718132..78718157, + |
2.55e-98 | FFCP PHASE1:Hg19::chr1:66713214..66713221,+#_57fed55761a10e5c25e283baa5099efe | p@chr1:66713214..66713221, + |
2.55e-98 | FFCP PHASE2:Hg19::chr5:58471631..58471634,+#_57fed55761a10e5c25e283baa5099efe | p@chr5:58471631..58471634, + |
2.55e-98 | FFCP PHASE2:Hg19::chr14:68527802..68527806,+#_57fed55761a10e5c25e283baa5099efe | p@chr14:68527802..68527806, + |
2.55e-98 | FFCP PHASE1:Hg19::chr4:139501766..139501798,-#_57fed55761a10e5c25e283baa5099efe | p@chr4:139501766..139501798, - |
2.55e-98 | FFCP PHASE2:Hg19::chr1:1361494..1361497,+#_57fed55761a10e5c25e283baa5099efe | p7@TMEM88B |
2.55e-98 | FFCP PHASE2:Hg19::chr18:39859562..39859566,+#_57fed55761a10e5c25e283baa5099efe | p@chr18:39859562..39859566, + |
2.55e-98 | FFCP PHASE1:Hg19::chr9:79519652..79519664,-#_57fed55761a10e5c25e283baa5099efe | p@chr9:79519652..79519664, - |
2.55e-98 | FFCP PHASE1:Hg19::chr5:24554148..24554153,+#_57fed55761a10e5c25e283baa5099efe | p1@ENST00000510391 |
2.55e-98 | FFCP PHASE2:Hg19::chr1:66713214..66713221,+#_57fed55761a10e5c25e283baa5099efe | p@chr1:66713214..66713221, + |
2.55e-98 | FFCP PHASE2:Hg19::chr12:127992016..127992052,+#_57fed55761a10e5c25e283baa5099efe | p@chr12:127992016..127992052, + |
2.55e-98 | FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_57fed55761a10e5c25e283baa5099efe | p41@NAV3 |
2.55e-98 | FFCP PHASE1:Hg19::chr19:20382476..20382481,-#_57fed55761a10e5c25e283baa5099efe | p@chr19:20382476..20382481, - |
2.55e-98 | FFCP PHASE2:Hg19::chr4:139501766..139501798,-#_57fed55761a10e5c25e283baa5099efe | p@chr4:139501766..139501798, - |
2.55e-98 | FFCP PHASE2:Hg19::chr9:79519652..79519664,-#_57fed55761a10e5c25e283baa5099efe | p@chr9:79519652..79519664, - |
2.55e-98 | FFCP PHASE2:Hg19::chr5:24554148..24554153,+#_57fed55761a10e5c25e283baa5099efe | p1@ENST00000510391 |
2.55e-98 | FFCP PHASE1:Hg19::chr11:79291300..79291301,+#_57fed55761a10e5c25e283baa5099efe | p@chr11:79291300..79291301, + |
2.55e-98 | FFCP PHASE2:Hg19::chr10:118927879..118927891,+#_57fed55761a10e5c25e283baa5099efe | p@chr10:118927879..118927891, + |
2.55e-98 | FFCP PHASE2:Hg19::chr19:20382476..20382481,-#_57fed55761a10e5c25e283baa5099efe | p@chr19:20382476..20382481, - |
2.55e-98 | FFCP PHASE2:Hg19::chr3:39827273..39827281,+#_57fed55761a10e5c25e283baa5099efe | p@chr3:39827273..39827281, + |
2.55e-98 | FFCP PHASE1:Hg19::chr11:20791058..20791067,+#_57fed55761a10e5c25e283baa5099efe | p10@NELL1 |
2.55e-98 | FFCP PHASE2:Hg19::chr17:12935401..12935405,-#_57fed55761a10e5c25e283baa5099efe | p@chr17:12935401..12935405, - |
2.55e-98 | FFCP PHASE1:Hg19::chr7:88535666..88535671,+#_57fed55761a10e5c25e283baa5099efe | p@chr7:88535666..88535671, + |
2.55e-98 | FFCP PHASE2:Hg19::chr8:130597061..130597068,+#_57fed55761a10e5c25e283baa5099efe | p@chr8:130597061..130597068, + |
2.55e-98 | FFCP PHASE1:Hg19::chr11:57030314..57030346,+#_57fed55761a10e5c25e283baa5099efe | p@chr11:57030314..57030346, + |
2.55e-98 | FFCP PHASE1:Hg19::chr4:130221053..130221071,+#_57fed55761a10e5c25e283baa5099efe | p@chr4:130221053..130221071, + |
2.55e-98 | FFCP PHASE1:Hg19::chr10:118927879..118927891,+#_57fed55761a10e5c25e283baa5099efe | p@chr10:118927879..118927891, + |
2.55e-98 | FFCP PHASE1:Hg19::chr21:22483836..22483880,+#_57fed55761a10e5c25e283baa5099efe | p@chr21:22483836..22483880, + |
2.55e-98 | FFCP PHASE2:Hg19::chr7:88535666..88535671,+#_57fed55761a10e5c25e283baa5099efe | p@chr7:88535666..88535671, + |
2.55e-98 | FFCP PHASE2:Hg19::chr14:85119696..85119699,+#_57fed55761a10e5c25e283baa5099efe | p@chr14:85119696..85119699, + |
2.55e-98 | FFCP PHASE2:Hg19::chr4:130221053..130221071,+#_57fed55761a10e5c25e283baa5099efe | p@chr4:130221053..130221071, + |
2.55e-98 | FFCP PHASE2:Hg19::chr21:22483836..22483880,+#_57fed55761a10e5c25e283baa5099efe | p@chr21:22483836..22483880, + |
2.55e-98 | FFCP PHASE1:Hg19::chr1:154942133..154942148,-#_57fed55761a10e5c25e283baa5099efe | p@chr1:154942133..154942148, - |
2.55e-98 | FFCP PHASE2:Hg19::chr1:154942133..154942148,-#_57fed55761a10e5c25e283baa5099efe | p@chr1:154942133..154942148, - |
2.55e-98 | FFCP PHASE2:Hg19::chr14:88034381..88034386,-#_57fed55761a10e5c25e283baa5099efe | p@chr14:88034381..88034386, - |
2.55e-98 | FFCP PHASE1:Hg19::chr3:27750995..27750997,-#_57fed55761a10e5c25e283baa5099efe | p@chr3:27750995..27750997, - |
2.55e-98 | FFCP PHASE2:Hg19::chr16:51174920..51174928,-#_57fed55761a10e5c25e283baa5099efe | p@chr16:51174920..51174928, - |
2.55e-98 | FFCP PHASE2:Hg19::chr3:181328346..181328351,+#_57fed55761a10e5c25e283baa5099efe | p22@SOX2-OT |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Twelve pairs of cranial nerves exit/enter the cranium through openings in the skull. The nerves contain efferent axons with motor and glandular functions, as well as afferent axons from cranial ganglia with sensory functions. The nerves are numbered in a rostral to caudal sequence, with the exception of the lateral line nerves.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.