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UBERON:0002372

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Name:tonsil
Namespace:FANTOM
Definition:"Portion of lymphoid tissue on either side of the throat." [Wikipedia:Tonsil]
Xrefs:
links:

BTO:0001387
EFO:0001401
EV:0100052
FMA:9609
GAID:341
MA:0000143
MESH:A.03.867.603.925
ncithesaurus:Tonsil
ncithesaurus:Tonsilar_Tissue
ncithesaurus:Tonsillar_Lymphoid_Tissue
OpenCyc:Mx4rvVivrZwpEbGdrcN5Y29ycA

VHOG:0001139
Synonyms: "Mandel" RELATED [BTO:0001387]
Comments:Most commonly, the term "tonsils" refers to the palatine tonsils that can be seen in the back of the throat.
Alt_id: UBERON:FMA_9609-MA_0000143
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001962(gut-associated lymphoid tissue),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001735(tonsillar ring)



Children

derives from:FF:0010047 (human tonsil - adult sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002372 (tonsil), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data