UBERON:0003891
From FANTOM5_SSTAR
Name: | stroma | ||
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Namespace: | FANTOM | ||
Definition: | "connective, non-functional supportive framework of a biological cell, tissue, or organ. Contrast with parenchyma." [Wikipedia:Stroma_of_ovary_%28animal_tissue%29] | ||
Xrefs: |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000064(organ part) |
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Children
is a: | UBERON:0001777 (substantia propria of cornea),UBERON:0002319 (mesangium),UBERON:0002321 (extraglomerular mesangium),UBERON:0005169 (interstitial tissue) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11527-119I6 (Keratocytes, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11607-120I5 (Keratocytes, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
- 11688-122I5 (Keratocytes, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003891 (stroma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data