UBERON:0003891
From FANTOM5_SSTAR
| Name: | stroma | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "connective, non-functional supportive framework of a biological cell, tissue, or organ. Contrast with parenchyma." [Wikipedia:Stroma_of_ovary_%28animal_tissue%29] | ||
| Xrefs: |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part) |
|---|
Children
| is a: | UBERON:0001777 (substantia propria of cornea),UBERON:0002319 (mesangium),UBERON:0002321 (extraglomerular mesangium),UBERON:0005169 (interstitial tissue) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11527-119I6 (Keratocytes, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11607-120I5 (Keratocytes, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
- 11688-122I5 (Keratocytes, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003891 (stroma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:52362029..52362031,+#_ed91efed8cae188a2525747f14883032 | p@chr3:52362029..52362031, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:150910973..150910976,-#_ed91efed8cae188a2525747f14883032 | p@chr7:150910973..150910976, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:150910973..150910976,-#_ed91efed8cae188a2525747f14883032 | p@chr7:150910973..150910976, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:52362029..52362031,+#_ed91efed8cae188a2525747f14883032 | p@chr3:52362029..52362031, + |
| 2.22e-40 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_003544a64a800699856f19b394e10821 | p@chr2:133426030..133426041, - |
| 2.22e-40 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_003544a64a800699856f19b394e10821 | p@chr2:133426030..133426041, - |
| 2.71e-40 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_c6a02a8fad1d5c73996bd5d071292764 | p23@TTC39A |
| 2.71e-40 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_c6a02a8fad1d5c73996bd5d071292764 | p23@TTC39A |
| 7.07e-34 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_5e1e0e397fd2fc23db418bba10a5ee1b | p@chr2:133426106..133426117, - |
| 7.07e-34 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_5e1e0e397fd2fc23db418bba10a5ee1b | p@chr2:133426106..133426117, - |
| 2.63e-26 | FFCP PHASE1:Hg19::chr1:145589059..145589070,-#_fc3af989a49a4931857dd94cd94f9cdc | p3@NUDT17 |
| 2.63e-26 | FFCP PHASE2:Hg19::chr1:145589059..145589070,-#_fc3af989a49a4931857dd94cd94f9cdc | p3@NUDT17 |
| 6.73e-26 | FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_9b630a56802e10912124b598a79a6b38 | p8@PAX2 |
| 6.73e-26 | FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_9b630a56802e10912124b598a79a6b38 | p@chr10:134535354..134535366, - |
| 6.73e-26 | FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_9b630a56802e10912124b598a79a6b38 | p8@PAX2 |
| 6.73e-26 | FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_9b630a56802e10912124b598a79a6b38 | p@chr10:134535354..134535366, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr10:92617531..92617541,-#_481c0431e2cb86b0aa78c75a570d40cb | p8@HTR7 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_481c0431e2cb86b0aa78c75a570d40cb | p10@PAX2 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr6:113369869..113369877,+#_481c0431e2cb86b0aa78c75a570d40cb | p@chr6:113369869..113369877, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr15:49255230..49255248,-#_481c0431e2cb86b0aa78c75a570d40cb | p16@SHC4 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:22932230..22932233,-#_481c0431e2cb86b0aa78c75a570d40cb | p5@ENST00000520840, p5@ENST00000523806 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr6:113369869..113369877,+#_481c0431e2cb86b0aa78c75a570d40cb | p@chr6:113369869..113369877, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:22932230..22932233,-#_481c0431e2cb86b0aa78c75a570d40cb | p5@ENST00000520840, p5@ENST00000523806 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_481c0431e2cb86b0aa78c75a570d40cb | p@chr9:81641483..81641491, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr10:92617531..92617541,-#_481c0431e2cb86b0aa78c75a570d40cb | p8@HTR7 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_481c0431e2cb86b0aa78c75a570d40cb | p@chr9:81641483..81641491, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_481c0431e2cb86b0aa78c75a570d40cb | p10@PAX2 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr15:49255230..49255248,-#_481c0431e2cb86b0aa78c75a570d40cb | p16@SHC4 |
| 9.82e-26 | FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_9b0396dc1db922f06a85405b1ce35859 | p19@PEMT |
| 9.82e-26 | FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_9b0396dc1db922f06a85405b1ce35859 | p19@PEMT |
| 7.18e-23 | FFCP PHASE2:Hg19::chr11:124629023..124629069,+#_a84b043358ce3fce5fcb9161e286a476 | p1@ENST00000504932 |
| 7.18e-23 | FFCP PHASE1:Hg19::chr11:124629023..124629069,+#_a84b043358ce3fce5fcb9161e286a476 | p1@ENST00000504932 |
| 5.72e-21 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_049994bfbd18f0e0956d4fbd83260448 | p@chr17:171082..171101, + |
| 5.72e-21 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_049994bfbd18f0e0956d4fbd83260448 | p@chr17:171082..171101, + |
| 6.33e-21 | FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_8724491dc733c63a469ac495b490c359 | p@chr3:172384246..172384250, + |
| 6.33e-21 | FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_8724491dc733c63a469ac495b490c359 | p@chr3:172384246..172384250, + |
| 7.74e-21 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_71de51b5eb8c9f7718864013ded11c0f | p@chr1:45087902..45087912, + |
| 7.74e-21 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_71de51b5eb8c9f7718864013ded11c0f | p@chr1:45087902..45087912, + |
| 1.15e-20 | FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_099b9459c62b68873514047a6089dd1b | p5@PAX2 |
| 1.15e-20 | FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_099b9459c62b68873514047a6089dd1b | p5@PAX2 |
| 1.56e-20 | FFCP PHASE1:Hg19::chr17:38498236..38498251,+#_a3f0792b76a8ec65de240203c1a2ea3b | p24@RARA |
| 1.56e-20 | FFCP PHASE2:Hg19::chr17:38498236..38498251,+#_a3f0792b76a8ec65de240203c1a2ea3b | p24@RARA |
| 5.64e-19 | FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_db45090fc08cd70e2434889a4ae9cabf | p6@PAX2 |
| 5.64e-19 | FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_db45090fc08cd70e2434889a4ae9cabf | p6@PAX2 |
| 5.84e-19 | FFCP PHASE1:Hg19::chr20:25176603..25176614,+#_ceeca1c6aa30470d023a6203a780a19f | p@chr20:25176603..25176614, + |
| 5.84e-19 | FFCP PHASE2:Hg19::chr20:25176603..25176614,+#_ceeca1c6aa30470d023a6203a780a19f | p@chr20:25176603..25176614, + |
| 6.18e-19 | FFCP PHASE1:Hg19::chr9:114808729..114808743,+#_b20dfeb9ceafa21666af1341a725e185 | p@chr9:114808729..114808743, + |
| 6.18e-19 | FFCP PHASE2:Hg19::chr9:114808729..114808743,+#_b20dfeb9ceafa21666af1341a725e185 | p@chr9:114808729..114808743, + |
| 6.18e-19 | FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_b20dfeb9ceafa21666af1341a725e185 | p3@CRB2 |
| 6.18e-19 | FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_b20dfeb9ceafa21666af1341a725e185 | p3@CRB2 |
| 3.48e-18 | FFCP PHASE2:Hg19::chr6:35464729..35464738,-#_acf5652c3b221e0ef70a8ae429b578ff | p3@TEAD3 |
| 3.48e-18 | FFCP PHASE1:Hg19::chr6:35464729..35464738,-#_acf5652c3b221e0ef70a8ae429b578ff | p3@TEAD3 |
| 7.62e-18 | FFCP PHASE2:Hg19::chr10:33624581..33624593,-#_3063d95ad89b866d8d7f2f795a54e5da | p@chr10:33624581..33624593, - |
| 7.62e-18 | FFCP PHASE1:Hg19::chr10:33624581..33624593,-#_3063d95ad89b866d8d7f2f795a54e5da | p@chr10:33624581..33624593, - |
| 8.69e-18 | FFCP PHASE1:Hg19::chr1:44820685..44820695,-#_6f0c1e9c17e33de8d2550561e970e938 | p10@ERI3 |
| 8.69e-18 | FFCP PHASE1:Hg19::chr21:47410794..47410799,+#_6f0c1e9c17e33de8d2550561e970e938 | p@chr21:47410794..47410799, + |
| 8.69e-18 | FFCP PHASE2:Hg19::chr1:44820685..44820695,-#_6f0c1e9c17e33de8d2550561e970e938 | p10@ERI3 |
| 8.69e-18 | FFCP PHASE2:Hg19::chr21:47410794..47410799,+#_6f0c1e9c17e33de8d2550561e970e938 | p@chr21:47410794..47410799, + |
| 8.69e-18 | FFCP PHASE1:Hg19::chr6:151770193..151770196,-#_6f0c1e9c17e33de8d2550561e970e938 | p@chr6:151770193..151770196, - |
| 8.69e-18 | FFCP PHASE2:Hg19::chr6:151770193..151770196,-#_6f0c1e9c17e33de8d2550561e970e938 | p@chr6:151770193..151770196, - |
| 1.03e-17 | FFCP PHASE2:Hg19::chr5:79375654..79375674,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr5:79375654..79375674, + |
| 1.03e-17 | FFCP PHASE2:Hg19::chr1:858638..858648,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr1:858638..858648, + |
| 1.03e-17 | FFCP PHASE2:Hg19::chr11:65265332..65265342,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p19@MALAT1 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr1:9970194..9970195,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p14@CTNNBIP1 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr2:25383828..25383855,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p4@POMC |
| 1.03e-17 | FFCP PHASE1:Hg19::chr11:65265332..65265342,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p19@MALAT1 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr10:74020629..74020634,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr10:74020629..74020634, - |
| 1.03e-17 | FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr7:27164585..27164612, - |
| 1.03e-17 | FFCP PHASE2:Hg19::chr11:555661..555679,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr11:555661..555679, + |
| 1.03e-17 | FFCP PHASE2:Hg19::chr15:101459410..101459421,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p2@ENST00000560068 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr10:43133595..43133606,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr10:43133595..43133606, - |
| 1.03e-17 | FFCP PHASE1:Hg19::chr5:79375654..79375674,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr5:79375654..79375674, + |
| 1.03e-17 | FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr7:27164585..27164612, - |
| 1.03e-17 | FFCP PHASE1:Hg19::chr2:25383828..25383855,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p4@POMC |
| 1.03e-17 | FFCP PHASE1:Hg19::chr1:858638..858648,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr1:858638..858648, + |
| 1.03e-17 | FFCP PHASE1:Hg19::chr10:74020629..74020634,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr10:74020629..74020634, - |
| 1.03e-17 | FFCP PHASE1:Hg19::chr11:555661..555679,+#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr11:555661..555679, + |
| 1.03e-17 | FFCP PHASE1:Hg19::chr1:9970194..9970195,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p14@CTNNBIP1 |
| 1.03e-17 | FFCP PHASE1:Hg19::chr15:101459410..101459421,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p2@ENST00000560068 |
| 1.03e-17 | FFCP PHASE1:Hg19::chr10:43133595..43133606,-#_c020f83ad058f2a4b6b48ef71f4693b8 | p@chr10:43133595..43133606, - |
| 1.57e-17 | FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_7d129ad8535ee1af87df3a838fb5b15a | p@chr2:113984760..113984792, + |
| 1.57e-17 | FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_7d129ad8535ee1af87df3a838fb5b15a | p@chr2:113984760..113984792, + |
| 1.86e-17 | FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_819c5304a24d600b1ed05546f6460691 | p13@SPOCK2 |
| 1.86e-17 | FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_819c5304a24d600b1ed05546f6460691 | p13@SPOCK2 |
| 2.19e-17 | FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_6fbb88ce43e10ef0ba676a99754fd6bb | p25@PHLDB1 |
| 2.19e-17 | FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_6fbb88ce43e10ef0ba676a99754fd6bb | p25@PHLDB1 |
| 1.21e-16 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_94fc48997abda1b97bd6635e3e775208 | p@chr2:693362..693373, + |
| 1.21e-16 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_94fc48997abda1b97bd6635e3e775208 | p@chr2:693362..693373, + |
| 3.32e-16 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_fced78c7663172238db7194917c27c36 | p@chr7:140227349..140227360, - |
| 3.32e-16 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_fced78c7663172238db7194917c27c36 | p1@RIPPLY1 |
| 3.32e-16 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_fced78c7663172238db7194917c27c36 | p@chr7:140227349..140227360, - |
| 3.32e-16 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_fced78c7663172238db7194917c27c36 | p1@RIPPLY1 |
| 5.26e-16 | FFCP PHASE2:Hg19::chr4:111536534..111536575,-#_2124076af279238b4b575c37400ecef9 | p1@ENST00000503456 |
| 5.26e-16 | FFCP PHASE1:Hg19::chr4:111536534..111536575,-#_2124076af279238b4b575c37400ecef9 | p1@ENST00000503456 |
| 6.61e-16 | FFCP PHASE2:Hg19::chr19:45261267..45261280,+#_73d1e661742defca2c5b950f4398433e | p@chr19:45261267..45261280, + |
| 6.61e-16 | FFCP PHASE1:Hg19::chr19:45261267..45261280,+#_73d1e661742defca2c5b950f4398433e | p@chr19:45261267..45261280, + |
| 1.92e-15 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_cf8992eb43cc5b19bddd853293a09d7b | p@chr17:171147..171161, + |
| 1.92e-15 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_cf8992eb43cc5b19bddd853293a09d7b | p@chr17:171147..171161, + |
| 3.67e-15 | FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_28e67dc11b65686822a56c4f9a523d90 | p@chr2:165477405..165477418, - |
| 3.67e-15 | FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_28e67dc11b65686822a56c4f9a523d90 | p@chr2:165477405..165477418, - |
