UBERON:0004178
From FANTOM5_SSTAR
Name: | aorta smooth muscle tissue | |
---|---|---|
Namespace: | FANTOM | |
Definition: | "A portion of smooth muscle tissue that is part of an aorta [Obol]." [OBOL:automatic] | |
Xrefs: |
| |
Synonyms: |
"adult aorta involuntary muscle" EXACT [OBOL:automatic] "adult aorta non-striated muscle" EXACT [OBOL:automatic] "adult aorta smooth muscle" EXACT [OBOL:automatic] "adult aorta smooth muscle tissue" EXACT [OBOL:automatic] "aorta involuntary muscle" EXACT [OBOL:automatic] "aorta non-striated muscle" EXACT [OBOL:automatic] "aorta smooth muscle" EXACT [OBOL:automatic] "aortic smooth muscle" EXACT [BTO:0001685] "dorsal aorta involuntary muscle" EXACT [OBOL:automatic] "dorsal aorta non-striated muscle" EXACT [OBOL:automatic] "dorsal aorta smooth muscle" EXACT [OBOL:automatic] "dorsal aorta smooth muscle tissue" EXACT [OBOL:automatic] "involuntary muscle of adult aorta" EXACT [OBOL:automatic] "involuntary muscle of aorta" EXACT [OBOL:automatic] "involuntary muscle of dorsal aorta" EXACT [OBOL:automatic] "involuntary muscle of trunk of aortic tree" EXACT [OBOL:automatic] "non-striated muscle of adult aorta" EXACT [OBOL:automatic] "non-striated muscle of aorta" EXACT [OBOL:automatic] "non-striated muscle of dorsal aorta" EXACT [OBOL:automatic] "non-striated muscle of trunk of aortic tree" EXACT [OBOL:automatic] "smooth muscle of adult aorta" EXACT [OBOL:automatic] "smooth muscle of aorta" EXACT [OBOL:automatic] "smooth muscle of dorsal aorta" EXACT [OBOL:automatic] "smooth muscle of trunk of aortic tree" EXACT [OBOL:automatic] "smooth muscle tissue of adult aorta" EXACT [OBOL:automatic] "smooth muscle tissue of aorta" EXACT [OBOL:automatic] "smooth muscle tissue of dorsal aorta" EXACT [OBOL:automatic] "smooth muscle tissue of trunk of aortic tree" EXACT [OBOL:automatic] "trunk of aortic tree involuntary muscle" EXACT [OBOL:automatic] "trunk of aortic tree non-striated muscle" EXACT [OBOL:automatic] "trunk of aortic tree smooth muscle" EXACT [OBOL:automatic] "trunk of aortic tree smooth muscle tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004237(blood vessel smooth muscle),UBERON:0004695(arterial system smooth muscle) |
---|---|
part_of: | UBERON:0000947(aorta) |
Children
part of: | CL:0002539 (aortic smooth muscle cell) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
... further results Mouse (Mus musculus)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004178 (aorta smooth muscle tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data