Personal tools

UBERON:0004198

From FANTOM5_SSTAR

Jump to: navigation, search

Name:comma-shaped body
Namespace:FANTOM
Definition:"The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron" [GO:0072049]
Xrefs:
links:

EMAPA:27681
EMAPA:27835

ZFA:0005588

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001231(nephron tubule),UBERON:0010532(primitive nephron)
develops_from:UBERON:0004209(renal vesicle)
part_of:UBERON:0001285(nephron)



Children

develops from:UBERON:0004199 (S-shaped body)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004198 (comma-shaped body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data