UBERON:0004821
From FANTOM5_SSTAR
| Name: | pulmonary alveolus epithelium | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "the epithelial layer of the alveoli[MP]. The layer of cells covering the lining of the tiny air sacs at the end of the bronchioles[BTO]." [BTO:0003511, MP:0010898] | |
| Xrefs: |
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| Synonyms: |
"alveolus epithelial tissue" EXACT [OBOL:automatic] "alveolus epithelium" EXACT [MA:0001771] "epithelial tissue of alveolus" EXACT [OBOL:automatic] "epithelium of alveolus" EXACT [OBOL:automatic] "pulmonary alveolar epithelium" EXACT [FMA:63915] "pulmonary alveolus epithelium" EXACT [MP:0010898] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000115(lung epithelium),UBERON:0000487(simple squamous epithelium) |
|---|---|
| part_of: | UBERON:0002299(alveolus of lung),UBERON:0004894(alveolar wall) |
Children
| derives from: | FF:0102060 (bronchioalveolar carcinoma cell sample) |
|---|---|
| part of: | CL:0000322 (pneumocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11510-119G7 (Alveolar Epithelial Cells, donor1)
- 11671-122G6 (Alveolar Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004821 (pulmonary alveolus epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
